Oncorhynchus tshawytscha (Chinook salmon): 112257397
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Entry
112257397 CDS
T05605
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K24527
RNA-binding protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112257397
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112257397
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_YTH1
DUF7126
c-SKI_SMAD_bind
RRM_ACIN1
SET_assoc
Motif
Other DBs
NCBI-GeneID:
112257397
NCBI-ProteinID:
XP_024286688
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All DBs
Position
LG09:complement(13634652..13661674)
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AA seq
230 aa
AA seq
DB search
MESAVESSPIVTENKGITLPEVESASIVSESEKPILSAVETVESPSTISENKELTPSAVK
DKDVSIVSECKKTTPCAVETNDNEDITIVSESKKPTKAPSAVENASIISESSSHEGHRLW
IGNIDPKITEYHLVKLLERFGKVKQFDFLFHKSGPMEGQPRGYCFVNFHTKEEAERAIHC
LNGKLALSKKLVVRWAHAQVKLPHNACGFDQKQHQTNSDTLPAWSMVRLS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgcagtggagagttcccccattgttacagaaaacaaaggcatcacactgcct
gaagtggagagtgcatccattgtttcagaaagcgagaaacctattctctctgcagtagag
acagtggagagtccctcaaccatttcagaaaacaaggaactcacaccttcagcagtgaag
gacaaggatgtctccatagtttcagaatgcaagaaaactaccccttgtgcagtggagact
aacgacaatgaggatatcactattgtttcagaaagcaagaaacccacaaaagcaccgtca
gcagtggagaatgcctctatcatttcagaaagttcgtcacatgagggccatcgcctgtgg
atcggtaacatcgatcccaaaatcacagagtaccacctggtgaagctgctggagaggttt
gggaaggtgaaacagtttgacttcctgttccacaagtctggaccaatggaaggccagccc
cgaggatactgcttcgttaacttccacaccaaagaggaagcagagcgggcgatccattgt
ctaaatgggaagctggccctctccaagaagctggtggtgcgctgggcacacgcacaggta
aagcttccccacaatgcctgtggatttgaccaaaaacaacaccagacaaacagtgacaca
ctacctgcctggtccatggtgcgactgagctaa
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