Oncorhynchus tshawytscha (Chinook salmon): 112257433
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Entry
112257433 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112257433
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112257433
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112257433
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
DUF6244
Zn_SUZ12
TFIIA
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
112257433
NCBI-ProteinID:
XP_024286751
LinkDB
All DBs
Position
LG09:complement(15973647..15984709)
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AA seq
391 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTSEHAMQCILTRVD
FDLYYGGEAFSVEQPQSFSCPYCGKMGYTETSLQEHVTSDHAETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHHGRGLGGPRARRTNMHFTSSSTGG
LSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQ
QAQAARQQLETARNATRRSNPGGNISATIPPPSANSVGVAESNPMASHSSQFLLTRLNEP
KMSEAERQALEGERADRSLFVQELLLSTLMREESSSSDEDERRDFASFGAMGCVDIMPLD
VALENLNLRESGTGGYNSSSRSSKEPPPPPL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgacgcgtgtttaaaagggaacttcagagggcgc
cggtacaagtgtttaatttgctacgactacgacctgtgcgcatcgtgctacgagagcgga
gctaccacaacgagacacacgtcggagcacgccatgcagtgtatattaaccagggtagac
tttgacctgtattatggcggcgaggcgttctcagtagagcagccccagagcttttcctgt
ccttactgtggtaaaatgggctacacagagacatccctacaggagcatgtcacctcagac
catgcagagacttccacagaggtgatctgtccaatatgtgctgcgttgccgggcggggac
cccaatcatgtgactgacgactttgctgctcatctcacacttgaacacagagcacctaga
gacttagatgagtccagtggcgtccggcatgtgcgtcggatgttccaccacggtcgtggg
ctgggcggtcctagggcacgcaggaccaacatgcactttactagcagctccactgggggg
ctctcttcctcacagagttcctcttactcccccagtaacagggaagccatggaccctata
gcagagctattgtctcagctgtcgggcgtgcgtcgctcggcgggtggccagctcaactcg
tcgggcccgtctgcgtctcagctgcagcagctacagatgcagctgcagttggagcgccag
caggcccaggcggcccgccagcagctggagacagccaggaacgccacacgacgctctaac
cccggcggcaacatcagtgccaccatcccacctcccagcgccaactcggtcggcgtggcc
gagagcaatcccatggcctcccacagctcccagttcctgctcacacgtttgaatgagccc
aagatgtcggaggcggagcggcaggcgctggagggtgagcgcgccgaccgcagcctgttt
gtccaggagctgctgttgagcacgctgatgcgtgaggagagctcctcttcggacgaggac
gagcggcgagactttgccagctttggggccatgggctgcgtggatatcatgcctttagac
gtggccctggagaacctcaacctcagggagagcggtactggcggttacaacagcagctct
aggagctctaaggaacctccaccacctcctctttga
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