Oncorhynchus tshawytscha (Chinook salmon): 112257443
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Entry
112257443 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase Praja-2 isoform X1
KO
K10634
E3 ubiquitin-protein ligase Praja2 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112257443
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112257443
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112257443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
112257443
NCBI-ProteinID:
XP_024286762
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Position
LG09:16130877..16144156
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AA seq
708 aa
AA seq
DB search
MTLSLPMTLAYCFFFAVSDGEKAWGTVMGQEAGKPAWPKPPGGHQTITGRRYGRRHAYVS
FRPTSAKHRNPASVEDWPDTEMDGVRRAHSISSKGNISSMLHAIFPVSSNSVHPEVKIKS
GKDPPHKKQSTSRQSSEAHSIHYKKSDQPVASDQDQNGGSKKSAEASAWPIPEDEDSNPS
NSSILSIVNIDAYEPDSSGGEEEGGQGSDASHGLQKRLDDMIFELGKEFDYLSGLHSYLY
TQSSEGTTDCSLRDTESVKDSRTDPRSDSNTEEIPLEWNISEHNRTDHLEISTEFRTPED
LATVGPKGPAELGNDDQRGTQSELVVRPKIRKQTSETHLEKWKSSHGEEAHCGSAKQATK
TKCVSAPPFFLTQTERPNQEFLFDYPPTDSYGLSPIERRGEYGEACSKFISDDEKDIWEE
LEDFNETGVPFMKAEESSECSEGEWSALWPSDSGLEKERGSSQESWVTLPGLDELHSSSL
EDVPELSLPPEEPTPLEEGEIPWLMYNEETGSSSDEDPDGMSHFVHPGLFILDGNNNLED
DSSLSEDLDAEWRLLDDFGEGFGMAQAISYVDPQLLTYMALEERLAQAMEAALAHLESLA
IDVEQAHPPATEQIIECLPQITILEDPTGQEHCCAICCGEYVKDEIATQLPCHHMFHKIC
VTLWLQKSGTCPVCRHILLPVVMETTANTSFVSDQDIPPSNHSAAGMR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacactaagtttgccgatgacgttggcttactgtttttttttcgcagtttcggacgga
gagaaagcctgggggacagtgatgggtcaggaagctggcaagccagcctggcccaaacca
cctggtggacatcagacaatcacaggaaggagatacggcaggaggcatgcatacgttagc
ttccgtccaacctctgccaagcacaggaacccagccagcgtggaggattggcccgatacg
gaaatggacggtgtccgtagagcgcattccatatcttcaaaaggaaacatctcctcgatg
cttcacgccatctttcctgtctcatcgaattcggttcacccagaggtgaaaatcaaatct
ggcaaagatcctccccacaagaaacagtcaacttctaggcagtcatcggaagcccactcc
atccactacaaaaagagtgaccaacctgtagcctcagaccaggaccaaaatggtggctcg
aagaaaagtgcagaagctagtgcatggcctatccccgaggacgaggacagcaacccttct
aattccagcatattgagcattgtaaatattgatgcttacgagccggacagtagtggcggc
gaggaggaggggggacagggttctgacgcgtctcacggtctccagaaaagactggatgac
atgatcttcgagctgggtaaagagtttgactatctcagcggtttgcactcgtatttgtac
acacaatctagtgaagggacgacagactgttccctcagagacactgagtcagtgaaagat
tctagaacagatcctagatcagattctaacacagaagaaatccctcttgagtggaatata
tcagaacacaacagaacagatcacctggaaatcagcactgagttccgaacaccagaggac
ctagcaactgttggccccaaaggtcctgctgagttggggaacgacgaccagagggggacc
cagtcagagttggtggttaggcccaaaattcgtaagcagactagtgaaacacacctggag
aagtggaagagttctcatggcgaggaggcacactgtggctcagcaaaacaggccaccaag
accaagtgtgtgtccgcaccgccattcttcctgacacaaacggaaaggccaaaccaggag
tttctctttgattaccctccgactgattcatatgggcttagccctatcgagaggaggggt
gaatatggagaagcttgtagcaaatttatttctgatgatgaaaaggacatctgggaagag
ctggaggacttcaatgagacgggtgttcctttcatgaaggctgaggaaagctcggagtgc
agcgagggggagtggtcagccttgtggccgtcggactctggcctggagaaggagcgtggc
tccagtcaggagagctgggtgacgctgcccggcctggacgaactgcacagcagcagtctt
gaggatgtccccgagctcagcctgccccctgaggagccgacccctctggaggagggagag
ataccgtggttgatgtacaacgaggagacgggcagcagtagtgacgaagacccagatggc
atgagtcactttgtccacccaggcctcttcatcctggatgggaacaacaacctggaggat
gactccagcttgagcgaggacctggacgctgagtggaggttgttagatgactttggagag
ggctttgggatggcccaggctatctcctatgtggatcctcagctcctcacatacatggct
cttgaagagcgtctggcccaagctatggaggcagctctagcccacctggagtccctggcc
attgatgtggagcaggcccaccctccggctacagaacagattatagagtgtctgcctcag
atcaccatattggaggaccccactggtcaggaacattgctgtgccatctgctgtggtgag
tacgtcaaagacgagattgcaacccagctgccgtgccaccacatgttccacaagatctgc
gtgactctctggctccaaaagtctgggacttgccctgtctgtcgtcacatactgttgcct
gttgtcatggagaccactgctaacacctcgtttgtgtcggatcaggacattccaccgtcc
aatcacagcgcagccggaatgcggtga
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