Oncorhynchus tshawytscha (Chinook salmon): 112257454
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Entry
112257454 CDS
T05605
Symbol
lin54
Name
(RefSeq) protein lin-54 homolog
KO
K21776
protein lin-54
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112257454 (lin54)
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Gene cluster
GFIT
Motif
Pfam:
TCR
MSL2-CXC
Motif
Other DBs
NCBI-GeneID:
112257454
NCBI-ProteinID:
XP_024286779
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Position
LG09:16831935..16850148
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AA seq
779 aa
AA seq
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MDVVSPELNSLLPDEIMDTEAIIMDDDPPAESPAASGQSQPSDDSPVPMEMDVPAVPEIV
SLCSDAPPTQLTQAGTTSTPTGSTLCSTTSATQLLLTSSTVSSSSLTLRPATASTLTSTT
PKTTSSLSRVSLTSGGLQKLSAHHQIILNKVASSPGADTTRSQGTTTTTPGGQQFMVTAI
GKSGQPIVLQLPHTGSKSTSVQGLGEAKANPQHFKVVTVSSASQVSTLQAQQLKTVQIAK
KTQVSSAGPIKFVFTKAVNNKGLTAQTSVSNVITGRVLSTSSPVTPPRTITLSETLGSSS
KIAISPLKSPSKLTVVSVASQVPNSPQKSVSLPLNMAHLGHQILLQQSTATSPAKTMKPV
QTVTVGGVGATQFKTIFPLSTPSNVQQIQVPGSRFHYVRLVTATTGSSTGHAGSPITNSS
MTAKPMVVNTTQVRMSVPIVPAQTMKQVVPKPLTSSGQVLTTQTQQRLIMPATSLPQIQP
NLTNLPPGTVLAPAPGSGNMGYAVLPAQYVTQLQQSAYVTLASSSGFSTPTGIQTQARLP
LNGLSTSGAAFRPRKPCNCTKSQCLKLYCDCFANGEFCQNCNCTNCFNNLEHETDRAKAI
KACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECYEAKIMCSSTCKCVG
CKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISDLLTRTTPAITSGGGRMPYTF
VTKEVAEVTCECLLEQAEQAELNQQPQATAERMILEEFGRCLMRIISSAGKTDCPSINC
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggtgtcgccagagctgaacagtctgctccctgatgagatcatggacacagag
gccatcatcatggatgacgacccccccgccgagtcccctgcagcctctggccaatcacag
cctagtgacgactcaccagtccccatggaaatggatgtgcccgctgtcccagagatcgta
agcctgtgttcggacgcccctccaacccagctgacccaagccgggaccacctccaccccc
acaggttccaccctctgtagcaccacctctgctacccagctcctcctcacctcttccacg
gtttcatcctcctccctcaccttgcgacccgccacagcctccaccctaacctcaaccacc
cctaaaaccaccagcagcctctcccgggttagtctcacctcggggggcttacagaagctc
tcagcccaccaccagatcatcctcaacaaggtggcctcatccccaggcgcagacaccacc
aggtcccaaggcaccaccaccactactccagggggccagcagttcatggtgacggccata
ggaaagtctggccagcctattgtgctgcagctgccccacacaggctccaagtctacctca
gtgcagggtctgggggaggccaaggccaacccgcagcatttcaaggtggtgacggtcagc
tcggccagtcaggtatccaccctgcaggcccagcagctgaagactgtacagattgctaag
aaaactcaggtgtcttcggctggaccaataaagtttgtcttcactaaagctgtcaacaac
aaaggtctgactgcccagacatcagtatccaatgtcattacaggtcgggtcctgtccaca
agcagcccggtgacccccccgcggaccatcaccctctctgagaccctcggctccagcagc
aagatcgccatctcccccctcaagtcgcccagcaagttgacggtggtgtcggtggcctca
caggtccccaactcccctcagaagtcagtgtctctgcctctcaacatggcccacctggga
catcagatactattacaacagtctacagccacctcaccagccaagaccatgaagcctgtg
cagactgtgacggtgggaggggtgggcgccacccaatttaagaccatctttcccctgtcc
accccatccaacgtgcagcagatccaggtgccaggcagccgcttccactacgtcaggctg
gtcactgccaccacgggcagcagcacgggacatgccggcagccccatcactaactcatcc
atgacagccaagcccatggtggtcaacacaacccaagtcaggatgtctgtccccattgtc
ccagcacagacaatgaagcaggtggtacctaagcccttgacatcgtcaggccaggtgctg
accactcagacccagcagaggttgatcatgcccgccacatcgctaccccagattcagccc
aacctcaccaatctacccccgggtaccgtattggcgcctgcccctggctctgggaacatg
ggctacgccgtgttgcccgcacaatacgtcacacagctccagcaatctgcgtatgtgact
ctggccagcagctctgggttctccacccctacaggcatccagactcaggccagactgcct
ctcaatggcttatcaacatcaggcgctgccttcagaccacggaagccctgtaactgcacc
aaatctcagtgtctcaaactgtactgtgactgttttgccaacggggagttctgtcagaac
tgtaactgtaccaactgcttcaacaacctggaacacgagacggaccgagctaaagccatc
aaggcgtgtctggaccgcaacccggaggcgttcaagccgaaaatcggtaaaggtaaagag
ggcgagtcggaccgcagacacagcaaaggctgcaactgtaaacgctcaggctgcctgaag
aactactgcgagtgttacgaggccaagatcatgtgctcgtctacctgtaagtgtgtgggc
tgtaagaactttgaagagagccctgagaggaagactctgatgcacctggctgacgcagct
gaggtcagagttcaacaacaaacggcagccaagaccaagctgtcatcacagatctcagac
ctgcttacacggaccactcccgccatcaccagcggaggggggaggatgccctatacgttt
gtgacgaaggaggtggcggaggtgacgtgcgagtgtctgctggagcaggctgagcaggca
gagctgaaccagcagccccaggccaccgcagagaggatgatcctggaggagtttggacgc
tgcctcatgaggatcatcagctcggcgggcaagacagactgtccctccatcaactgctag
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