Oncorhynchus tshawytscha (Chinook salmon): 112257465
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Entry
112257465 CDS
T05605
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112257465
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112257465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
112257465
NCBI-ProteinID:
XP_042182557
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All DBs
Position
LG09:17064251..17155578
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AA seq
1134 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYNTNCRQGQRAGGTLCGGSGAAQGGSSKTQTPESLLDISARK
VAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFSTGGEESGTSGENIDET
RLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPATPSEPELVCSVSVSFDRCKITAVTCS
CGNKDIFYCAHVVALALYRVRKPEQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVL
PTAQKLADEILSTNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHG
SGKQLNLLFSKVREMLKMRDSNGARMLTLITEQFMGDPRLALWRQQGTTMTDKYRQLWDE
LGTLWMCIVLNPHCKSEQKCVWLRQLRRWNSIDVCPWEDGNHGNELPNLTHALPHGNPDL
SSRPHRTVFTRAIEACDLHWQDTHLQRVITHDLCTHTHTHCPHDNHGSGGALFDARGWPL
WHEHVPTACARVDALRSHGYPREALRLAIAIVNTLKRQQQKQLQLLRNHKKELLHKGMTS
VTNMEGWVGHPLDPIGTLFSTLLDTGRGDEEGGNAFLDFSGSVSSAKRLEPHLFPAQHFL
DDGQSFVTLAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELNDALVKIFRK
QAVFLLEAGPYSGLGELLYRESVPMHTFAKYLFTSLLPHDAELAYKIALRAMRLPVLETT
APSGDLSRPHHIVSMVPNRYPRWFTLSHIESQQCELASTMLTAAKGDGRKLETVLESIQK
NIHSSSHIFKLAQDAFKIATLMDSLPDLTLLKVSLELGLQVMRMTLSTLNWRRREMVRWL
VTCATEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNTTIVRLHLDCHQQENLASSAR
TLALQCAMKDPQNCSLSALTLCEKDHIAFETAYQIVLDAAVTGMSYTQLFTIARYMEHRG
YPMRAYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELSAVIPLVVKSVKCA
TVLSDILRRCTLTTPGMVALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHIS
PRHYSEFIEFLSKARETFLMAQDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgttcagcagcccccagccaaacggctctgctgtagaccgggttataac
acgaattgtagacagggacaacgggccgggggtacgttatgtggcggttcgggtgcggcc
caaggcgggtcgagcaaaacccagaccccggagtctctgttggacatctcggcccggaaa
gtggctgagaagtggccgtttcaacgggtagaggagcgcttcgaacggatcccggagccc
gtacagagacggatcgtttactggtctttcccaaggagtgaacgggagatctgcatgtat
tcttcgttcagtacagggggagaggagagtggaactagcggggaaaatattgatgagacg
cggctgcctttcagacgaggcatcgctctgttggagagcggctgtgtggacaacgtattg
caagtcgggttccacctcagtggaacggtaacagaaccggccacgccgtcggaacccgag
ctcgtctgcagcgtgagtgtcagcttcgaccgctgcaagataaccgcggtcacgtgcagc
tgtggcaataaggacatcttctactgcgcgcatgtggtagcgttggccctgtaccgcgta
cggaagcctgagcaggtcaaactgcacctgcccatctcagagacactgttccagatgaac
agagaccagctgcagaaatttgttcagtacctgataacagtacaccacacggaggtgctg
cccactgctcagaaactagctgatgagattctgtcaacaaactctgagatcaaccaggtc
catggggccccagaccccacggcaggggccagtgtagatgatgagaactgttggcacctg
gatgaggagcaggtccaggagcaggtgaaactctttctctcacagggaggataccacggc
tctgggaaacaactcaacctgctgttcagcaaggtgagagagatgttgaagatgcgtgac
tccaacggtgccaggatgttaacgctgatcacagaacagtttatgggcgaccctcgtctg
gcactgtggagacaacagggaaccaccatgaccgacaaatacagacagctgtgggatgag
ctaggtaccctgtggatgtgtattgtgctgaacccccactgtaagtcggagcagaagtgt
gtgtggctgagacagcttagacggtggaacagcatcgatgtgtgtccatgggaggacgga
aaccatggcaacgaactacccaacctcacacacgcactaccgcacggcaacccagacttg
tcgtctcgtcctcataggacagtgtttacgagggccattgaggcctgcgacctgcactgg
caggacacacacctgcagcgcgtcatcacacatgacctctgcacacacacacacacacac
tgtccccacgacaaccacggcagtggaggggcactgtttgacgcccgcggatggcccctc
tggcacgagcacgtcccaacagcgtgcgcgagggttgacgcgctgcggtcacatggttat
cccagggaagccttgcgattggccattgctattgtcaacacactcaaacggcagcaacag
aaacaactacagctcctccgcaaccacaaaaaagagctgctccataaaggcatgacgtca
gtcactaacatggagggctgggtgggccaccctttggaccctattggcactctgttcagc
accctactggacacgggacggggagatgaggaggggggcaacgccttcctagacttctca
ggctctgtgagttcagccaaaaggttggagccccacctcttcccagcacaacacttcctg
gacgatggccaatcgttcgtaacactggctgtagagacggctctgattggcttagggcag
cagagggtgatgcctgacggcctatacgcccaggagaaggtgtgtcgcaacgaagagcag
ctattggccaagctccaggaagtggaactgaacgatgccctggtcaagatcttccgcaag
caagcagtcttcctgctagaggctggtccatacagtggtctaggagagttgctctacaga
gagagtgttcccatgcatactttcgccaagtatctcttcacctccctactacctcacgac
gctgaactggcgtacaaaattgcactgagagccatgaggttaccggtcctggaaaccacg
gctccatcaggtgatctatccagacctcaccatatagtatctatggtccctaaccgctac
cctcgctggttcactctatctcacatagagtcacaacaatgtgaactggcctccaccatg
cttaccgcagccaaaggcgatgggcgtaagttagaaacggtgttagagtccatccagaag
aacatccactcctcgtctcacatcttcaaactggctcaggatgccttcaagatcgctact
ctgatggacagcctgccagacctcacactgcttaaagtctcactggagctgggccttcag
gtgatgagaatgactctgtccacgttgaactggaggaggagagagatggtacggtggctg
gtcacctgtgccacagaagttggtgtgtatgcgttggacagcatcatgcagagttggttc
accctgttcaccccgaccgaggccaccagcatcgtggccaccaccgtcatgtccaacacc
accatcgtccggctgcacctggactgtcaccagcaggagaacctggcctcctccgcccga
acactggccctgcagtgtgccatgaaggacccccagaactgttccctctccgccctcacc
ctctgtgagaaggaccacatcgccttcgagacggcctaccagatcgttctggacgcggcc
gtcacggggatgagctacacacagctctttacaatagccaggtacatggagcacagagga
tatcccatgagggcttacaagctggccacgctagccatggcccaccttaacctcagctac
aaccaggacacccacccggctatcaatgacgtgctgtgggcctgtgctctgagtcactct
ctggggaagaatgagctgtctgctgtcattcccctggtggtgaaaagtgtgaagtgcgcc
actgtgctgtcagacattttgagacggtgcacattgaccacgccgggcatggtggcgctg
cacagccgcaggaactctgggaagctgatgtcgctggacaaggctccactcaggcaactg
ctggacgccaccatcggagcctacatcaacaccacgcactctcgcctcacgcacatcagc
ccgcgccactacagcgagtttatagagtttctcagtaaggccagagagacgttcctcatg
gctcaggacggacacatccagtttacccagttcatagacaaccttaaacagatctacaag
ggcaagaagaaactcatgatgctcgtacgggagaggttcggttga
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