Oncorhynchus tshawytscha (Chinook salmon): 112257515
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Entry
112257515 CDS
T05605
Symbol
abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112257515 (abraxas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112257515 (abraxas1)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
112257515 (abraxas1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
DUF3461
JAB
Motif
Other DBs
NCBI-GeneID:
112257515
NCBI-ProteinID:
XP_024286911
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All DBs
Position
LG09:complement(19346014..19349651)
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AA seq
404 aa
AA seq
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MEDSNSYIRVSGFVLGSLMFQHLNSDSDVEGLILGETKAEERSNITDSQIDNIQFEHTIN
IQKHISCRKLNSFYNRIGEVNQDEIRHILSNYKEENVIGWYKQRRNTDQQITFREQVVHE
NLKRALSNHELIFLLLTPSEITTSGSTHKLEYAVFRSHGSQYCSVPVLVSNLGLLEEQDY
WRLSASCSSVNYNHAVRKHRSKFFSSDGSLHEVDEINDMNNSLQGELKMACKKVEESERL
VEKLLADVSDLRRMVNDRKQELGEISADGASTPAQPQENVLLCEVIKTLFPGASLLQTQA
LNFQGFPLPEFCCSTDHGIDIATTLPLILSHTLPKARKGRLGRGGGTSWRKRPLRESSEV
PKRRKGMLEETEESLSVSGSETEEDLIPANQNGNDLDVSNSPVF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcaaactcttatattcgcgtctccggatttgttcttggttcattgatgttt
cagcacttgaacagtgattctgatgtggaaggtctcattctcggggagaccaaagctgaa
gagcgaagcaacatcactgactctcaaatcgacaacatacagtttgagcatacaataaac
attcagaaacacatatcatgtcgcaagctcaatagcttctataatagaataggggaggtg
aaccaggatgaaataaggcacattttatccaactataaggaggagaatgtgattggttgg
tataaacagcggagaaacacagatcaacaaattaccttcagagagcaagtagtccacgag
aacctgaagagagcactctccaatcacgagctgatctttctgctactgacacccagtgag
atcacaacatcaggctccactcacaaactggagtatgcagtcttcagatcacatggcagt
cagtattgcagtgtacctgtcctggtcagcaacctgggtttgttggaagagcaggactac
tggagactctctgcatcttgttcatcagtcaactacaaccatgctgttaggaaacacaga
tctaaattcttctcctccgatggatctctgcatgaggtggatgagattaatgacatgaac
aactccttgcagggtgaactcaagatggcatgtaagaaagtggaggagagtgaacgattg
gtcgagaagctgcttgcagacgtttctgatctaagaaggatggtcaatgataggaaacaa
gagctgggagaaatctcagcagatggagcctccaccccggcacagccccaggagaatgtg
ctgctctgtgaggtcatcaaaacactatttcctggggcatctctactccaaacgcaggct
ctaaacttccaggggtttccattgcctgagttctgctgcagcactgaccatggcatagac
attgctacaacactgcctttgatcctgagtcatacactccctaaagccaggaaggggagg
cttgggagaggcggaggtacatcctggagaaaacgtccccttcgtgaatcatctgaggtg
cccaagaggaggaaaggcatgctggaggagactgaggagtctttgtcagtcagtgggtcc
gagaccgaggaggatttgatcccagccaatcagaacggaaatgatttagatgtgtccaat
tcccctgtcttctga
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