Oncorhynchus tshawytscha (Chinook salmon): 112257520
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Entry
112257520 CDS
T05605
Name
(RefSeq) homeobox protein Nkx-6.1-like
KO
K08030
homeobox protein Nkx-6.1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112257520
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112257520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
ABC_trans_N
PKK
Motif
Other DBs
NCBI-GeneID:
112257520
NCBI-ProteinID:
XP_024286919
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All DBs
Position
LG09:complement(19553517..19557139)
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AA seq
321 aa
AA seq
DB search
MLAVGQMDGSRQSAFLLSTAPLAALHSMTEMKTPLYPAYTLSSTGPASSTSPTATSPNPG
GIPMSSPGIKTSSGMSSLGSLHQCIALGTPHGINDILSRPSVLAPGAAAAVAASSSAGIL
SGLPRFSSLSPPPPPGLYFSPSAVAVARYPKPLTDLPGRTPIFWPGVMQSPHWRDARFAC
SPHQNSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVK
VWFQNRRTKWRKRHAAEMASAKKKQDSETERLNGASENEEDDDDYNKPLDPNSDDEKITQ
LLKKHKPNSSLLINTSENDSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagtggggcagatggacgggtcccgacagagcgctttcctcctaagcaccgca
cctttagcggctctgcatagcatgacggagatgaagaccccactctacccagcctacaca
ttatcttccaccggtccggcctcttctacctcacctactgccacctctccaaaccccggt
ggcattccgatgtcctcaccggggatcaaaacatcctccggaatgtcatcgctcggatcg
ctccatcaatgcattgcgctaggcacacctcatggaataaacgacatcctcagtcgtcct
tcggtccttgccccaggagctgctgctgccgttgctgcgtcctcttctgccggcatcttg
tccggactgccccgcttcagtagcttgagccccccgccaccccctggactctacttcagc
cccagtgctgtggcagtggctcgctaccccaagcccttgacagaccttccaggcaggacc
ccgatattctggccaggagtcatgcaaagcccacattggagagacgccagattcgcatgt
tcaccgcatcaaaattctatactgcttgacaaagatggaaaaagaaagcacacacgtccc
accttctctggacagcaaatatttgccctagaaaagacttttgaacaaacgaaatatctg
gctggaccggagcgagcacgactggcctactcgctgggaatgacagagagccaagtaaag
gtgtggtttcaaaaccgaagaacgaaatggagaaaacgccacgcggctgagatggcttcg
gcaaagaagaagcaggattcggagacggagaggctgaacggggcctcggagaatgaagag
gacgatgatgattataacaagccgttggaccctaactcagacgacgagaaaataacacaa
ttactgaaaaaacacaaaccaaactcctcactccttattaatacatcagaaaacgacagt
tcgtag
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