Oncorhynchus tshawytscha (Chinook salmon): 112257523
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Entry
112257523 CDS
T05605
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112257523
03036 Chromosome and associated proteins [BR:
otw03036
]
112257523
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112257523
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
112257523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
CdvA
Motif
Other DBs
NCBI-GeneID:
112257523
NCBI-ProteinID:
XP_024286924
LinkDB
All DBs
Position
LG09:complement(19614469..19617357)
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AA seq
346 aa
AA seq
DB search
MSKMEEYKENIQDRGGNVKLSSKPEEDDKSCSRVRVCSNIGEPVPQASPTHEDFSDPVYK
DIALANGHINRMNKDELRAKLAELKLDTSGVKDVLKKRLKNYYKKQKLSLTQSVTAGEAT
DTYYDYICVVDFEATCEQDNPADFTHEIIEFPVVLLNTHTLEIEDTFQEYVRPEVNTQLS
EFCVKLTGITQKMVDEADTFPDVLERVVLWLQEKELGTKYKYTLLTDGSWDMSKFMNTQC
RLNRLRFPQFAKKWINIKKLYGNFYKVPLTQTKLSCMLEKLGLKYEGRPHSGLDDSRNIA
HIAMRMLQDGCQLRINERMHEGQLRAVPSSAPVEGAPPPHTPRSRD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatggaggaatacaaagagaatattcaagacaggggtggcaatgtgaaattg
tcctctaaaccggaggaagatgacaagtcttgcagcagagtcagagtttgtagtaacatc
ggtgaacccgtccctcaagcatctcctactcacgaggacttcagtgatcctgtttacaaa
gacattgctcttgcaaatggacatatcaaccgcatgaacaaggatgagcttcgtgccaaa
ctggcagaattgaagcttgacacaagtggtgtgaaggatgtgctgaagaagcggttgaag
aactactacaagaaacagaagctgtcgctgacgcagtctgtaacagcgggtgaagccacg
gatacctactacgactacatctgcgtggtggactttgaagcaacgtgtgaacaggacaac
cccgctgacttcactcatgaaatcattgagttcccagtggttctgctcaacacgcacact
ttagagattgaagacacctttcaggaatatgtcagaccagaagtcaacacacagctgtca
gagttctgtgtaaagttgacaggaataacacagaaaatggtggatgaagctgacacgttc
cctgatgtccttgagcgggttgtgctttggcttcaggagaaagagcttggcacaaaatac
aaatacactcttcttacagacggatcttgggacatgagcaagttcatgaacacccagtgc
cgtttaaatcgtctcagatttccacagtttgcaaagaagtggatcaacatcaaaaaatta
tacgggaacttctataaggtccctctcacccagaccaagctgagttgcatgcttgagaag
ctgggactaaaatacgagggccgccctcactctggcctggatgactcacgcaatatcgcc
cacattgcaatgcgcatgctgcaagacggctgccaactgcgcatcaacgagcgcatgcac
gaaggacagctgcgggctgtgcccagctctgcccctgtggaaggagccccacccccacat
accccccgcagcagagactag
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