Oncorhynchus tshawytscha (Chinook salmon): 112257528
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Entry
112257528 CDS
T05605
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112257528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112257528
04131 Membrane trafficking [BR:
otw04131
]
112257528
03029 Mitochondrial biogenesis [BR:
otw03029
]
112257528
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112257528
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112257528
mRNA cycle factors
P-body specific factors
112257528
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112257528
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112257528
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112257528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
BTB_SANBR
Ac76
AAA_16
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
112257528
NCBI-ProteinID:
XP_024286932
UniProt:
A0A8C8GJ59
LinkDB
All DBs
Position
LG09:complement(19721918..19795491)
Genome browser
AA seq
1833 aa
AA seq
DB search
MKRQQKEPNTIAKKQEETIDYEVYCQYTRVWIPDPEDVWRAAEIIKDYKEGEPILYLKLE
DETPLEYRIGPKDNALPFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTESNHIYTYC
GIVLVAINPYEQLQIYGEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSG
ESGAGKTVSAKYAMRFFATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKY
IQIGFDRSYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLALTSAE
DFIFTSQGENIFIEGVNDAEDFEKTREAFTLLGVNDSNQSSIFRIIASILHLGNVEICSE
RDGDSCHILKNDPHLAHFCQLLGVELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDA
LAKHIYAHMFDWIVEYVNKSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQ
QQFNQHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDVIEAKLGILDLLDEECKVPKGTDQN
WCQKLFDRLSSSVHFQKPRMSNTSFIVIHFADKVEYQCDGFLEKNRDTVYEEQINILKAS
KFQLMADLFQDTNKDSSISTSSSSKSSRVNVRASKPTPKVPNKEHRKTVGHQFRSSLQLL
METLNATTPHYVRCIKPNDEKEAFSFESRRAVQQLRACGVLETIRISAAGYPSRWTYPDF
FNRYRVLMKKSDMTIGDKKLVCRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADK
FRSACIKIQKTVRGWLQRVRYQKIRKSAINLQRYGRGYMARRYAEQLRLTRAALIFQKQY
RMVRERRDYLRVRQAVVTIQAFTRGTLTRRIFQEFLLHHKAMMIQKHVRGWLTRRKFRRA
RNAAITIQCAYRRMRAKRELKQLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQTNDLKT
QNEHLVVAKASLGSEVNKLQKELEMMRSRQGDGSQLTSLQDELEKLRAELQEAHTHMKKL
EEKHSNEKMGLEQRVEELDRENSMLKSEKEEMNRRILHHSKSTEDQESSASQSVGRVQAE
LDEERQRYQNLLREFSRLEQRYDNLQEAKFQPGHKRNNSTQSSLESDSNYPSISTSELGD
TDDAIQVVEEMGVEKAAMDIGVFMKLQKRVRELEQERKRLQVNLEKMEDQVNCKGIEPKT
TSEQESEDLAYNSLKRQELESENKKLKNDLNELRKAIADRASQNSSSNELQDGYNLLLGQ
LKAANEELEVRKEEVLILRTEIVSAAHQKEETTNQIETNNVPEWTNSKKPIDKEEAVRAY
HGLCESKKLLEAQLQSQARKHEDELAAFNTQIELLKDDIEKKQEMLNHTMSLSPEAQVEY
SVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVPDMEASSQPTKAKPQLTRQ
VTVQRREKDFEGMLEYYKEDEALLVKTLITDMKPNAVSATVPCLPAYILFMCIRHADYIN
DDQKVHSLLTSTINAIKKVLKKNNNDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQNTAK
QNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEHMMQPMIVSAMLESESIPSLAGVKPM
GYRNRSSSMDGEGPGSYTLEALIRQLGQFHSVMGEHGLDPEIAGQVIRQLFYSINAVTLN
NLLLRKDVCSWSTGMQLRYNISQMEEWLRGKNLHQSGAVVNIEPVIQAAQLLQVKKKTSQ
DAEAICSLCTSLTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQDRNDVPMLLVDTK
HTFPVLFPYTPSALSLETLHIPANLSLDFLTRV
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcaacagaaagaacctaacaccatagcgaaaaaacaagaggagacgattgac
tatgaagtttattgccagtacactcgggtgtggatcccagacccagaggatgtgtggaga
gctgcagagatcatcaaagattacaaggagggagagcccatcctgtacctcaaacttgaa
gatgaaacgccgttggaataccgcatcggacccaaagacaacgctcttcccttcctccgg
aaccctgatatcctggtgggggagaatgacctcacagctctcagctacctgcacgagcct
gctgtcctgcacaacctcaaagtgcgcttcaccgagtccaatcacatctacacatactgt
ggcattgtgctggtggccatcaacccctacgagcagctgcagatctatggagaggaggtc
atcaatgcctacagtgggcagaacatgggagacatggacccacacatctttgctgttgct
gaggaggcatacaagcagatggccagagatgagaggaaccaatccatcatagtaagtgga
gagtcaggggcagggaagaccgtctctgctaagtacgccatgcggttcttcgccactgtg
ggagggtcagccaacgacaccaatgttgaggagaaggtgctggcctccagccccatcatg
gaggctattggaaatgcgaaaaccactcgcaacgacaacagcagtcgttttgggaagtac
atccagattggttttgacaggagttatcacatcataggagccaacatgcgcacgtatctg
ctggagaagtcaagggtagtctttcaggcagaggatgagaggaattaccacatcttctac
cagctgtgtgcctcggctagcttgccagagttcaaagacctagccttgaccagtgcagag
gacttcatcttcacatcacaaggagagaacatcttcattgagggggttaatgatgctgag
gactttgagaagacgagagaagcatttacgttactgggtgttaatgacagcaatcaaagc
agcatattcagaatcatagcttccatcctgcatctgggaaacgtggagatctgctcggag
agagacggagactcctgccacatattaaagaacgaccctcacttggcacatttttgccag
ttgctgggggtggagctggagcagatggagcactggctatgtcacaggaagctggttacc
acgtcagagacctacgtcaagaacatgtctcgcaaacaggcagctaatgcacgcgacgca
ctcgccaagcacatctacgcccacatgtttgactggatcgtggagtatgtcaacaagtcc
ctgcacacctcctccaaacaacactctttcattggtgttctggacatctacggatttgag
acctttgaaataaacagctttgagcagttctgcatcaactacgccaatgagaaacttcag
cagcagttcaaccagcatgtgttcaagctggagcaggaggagtacatgaaggagcagatc
ccctggacgctcatcgacttctatgacaaccagccttgtattgatgtcatagaggccaag
ctgggaatcctggacctgctggatgaggagtgcaaggtgccaaaagggacagatcagaac
tggtgccagaagctgttcgatcgcctatcaagcagcgtccatttccagaaaccacggatg
tccaacacatctttcattgtcattcactttgctgataaggttgagtaccagtgtgacggg
ttcctggagaagaacagagacactgtctacgaggaacagattaacattctgaaggccagc
aagttccagctcatggcagatctgttccaggacactaataaagacagcagcatttccaca
tcttcctccagcaagtcctccagggtcaacgtgcgggcgtccaaaccaacacccaaagtc
cccaacaaggagcataggaaaaccgtgggccaccagttccgtagctccctgcagcttctc
atggagaccctgaatgccaccaccccccactatgtgcgttgcatcaagcctaatgatgag
aaggaggcattctcgtttgagtctaggagagctgtgcagcaactgagagcatgtggagtc
ctggagaccatccgcatcagtgctgctgggtacccatcaaggtggacgtacccagacttc
ttcaacagatacagagtcctcatgaagaagtcagatatgaccattggagacaagaagctg
gtgtgcaggaacctgctggagaccctggtcaaggacccagacaagttccagtttggtaag
accaagatcttcttcagagcaggccaagtggcctacctggagaagctgagggcagacaag
ttccgctccgcctgcatcaagatccagaagacggtgcgaggctggctgcagagggtccgc
taccagaagatccggaagtccgccatcaacctgcagagatatggccgtggatacatggcc
cgccggtatgcggagcagctgcgtctaacccgcgctgctctgatcttccagaagcagtat
cgtatggtcagagagcggagggactatctaagagtgagacaggctgttgtcaccatccag
gcctttaccaggggcacgttaacgcgcaggatcttccaggagttccttctgcaccacaaa
gccatgatgatccagaagcatgtccgaggctggctcaccaggaggaagttcaggcgggca
cggaacgccgccatcaccatccagtgtgcctaccgccgcatgcgagccaagcgggagctg
aaacagctgaagattgaagcgaggtccgctcaacatctgaagaagctcaacacgggcatg
gagaacaagatcgtccagctgcagaggaagatggatgaccagaccaacgatctgaagact
cagaatgagcacctggtggtggccaaagcctccctgggctcagaggtgaacaagctgcag
aaggagctggagatgatgcgcagtcgccagggagatggcagtcagctgacctctcttcag
gatgagctggagaagctcagggctgagctccaggaagcacacacccacatgaagaagctg
gaggagaagcacagcaacgagaagatgggactggaacagagagtggaggaactggacagg
gagaattctatgctgaagagtgaaaaggaggagatgaaccgaaggattctgcaccactcc
aagagcacggaagaccaggagagcagtgcatcccagagtgtgggtcgggtccaggcagag
ctggatgaggagaggcagcgctaccagaacctgctcagggagttctccagactggagcag
agatatgacaacctacaggaggccaagttccaacctggccacaagagaaacaattctact
cagagcagcctggagtctgactccaactatccttccatttctacctcggaattgggagac
actgacgatgcaatccaggtcgtagaggagatgggagtggagaaggcagcaatggacatt
ggtgtgttcatgaagctgcagaagcgtgttcgagagctggaacaggagaggaagagactg
caagtcaacctggaaaagatggaggaccaggttaactgcaagggaattgagccaaagact
acgtcggagcaagagagtgaggacctggcctacaacagtctcaagaggcaggagctggag
tctgagaacaaaaagctgaagaacgacctgaacgaactgaggaaggccattgctgaccgc
gcctcccagaacagctcctccaatgagctgcaggacggctacaacctgctgcttggccag
ctcaaagcagccaatgaggaactggaagtgcgcaaggaggaggtcctcatccttaggact
gaaattgtcagtgcagcccatcagaaagaggagacaaccaatcagatcgaaaccaataac
gtgcctgaatggaccaacagcaagaagcccatagacaaggaggaggctgtgagggcctac
catggactatgtgagtctaagaagctgctggaggcccagcttcagtctcaggccaggaag
cacgaggatgagctagcagcgttcaacacccagattgagctgctgaaggacgacatagag
aagaaacaggagatgctgaaccacactatgtctctgtcccctgaggcccaggtggagtac
agcgtccagcaggagatcacccgcctcaccaacgacaacctggacttaaaagagcttgtg
gagaaactggagaagaacgagaggaagctgaagaagcagctgaggatctacatgaagaaa
gttccagatatggaagcatcatcccagcccaccaaggccaagccacagttgacccgtcag
gtgactgtccagcgcagagagaaggactttgagggcatgctggagtactacaaggaggac
gaggctctgctggtcaaaacactcatcactgacatgaagcccaatgctgtatcagcaaca
gtgccctgcctacctgcctacatcctcttcatgtgcatccgccatgcggactacatcaac
gatgatcagaaggtccactctctgctcacctccaccatcaacgccattaagaaggtcctc
aagaaaaacaataatgactttgagatgacctccttctggctggccaacacgagtcgtctg
ctgcactgtctcaagcagtacagtggagatgaggcgtttatgactcagaacacagccaaa
cagaatgagcactgcctgaagaactttgacctggcagagtaccgccaggtgctgagtgat
ctctccattcagatctaccagcagctcatcaaggtggcagagcacatgatgcagcccatg
atcgtgtcggccatgttggagagtgagagcatccccagcctggcgggagtaaagcccatg
ggttacaggaaccgctcctccagtatggacggggagggcccggggagctacaccctagag
gccctgatcagacaactgggccagttccacagtgtgatgggcgagcacggcctggaccca
gagatagcaggccaggtgatccggcagctgttctacagcatcaacgctgtcaccctcaac
aacctgctgctcaggaaagacgtctgttcctggagcactggcatgcagctcaggtacaac
atcagtcagatggaggagtggctgagggggaagaaccttcaccagagcggggcggtggtt
aacatagagcccgttatccaggccgcccagctgctgcaggtcaagaagaagacgtcccag
gatgccgaggcgatctgctccctgtgcacctctctcaccatgcagcagatcgtaaaaatt
ctcaacctctacaccccactcaacgagtttgaggaaagagtcactgtgtcctttatccga
aacatccagaatcgtctgcaggataggaacgatgtcccaatgctcctggtggacaccaag
cacaccttccctgtcctgttcccctacaccccttccgccctcagcctggagaccctgcac
atccctgccaacctaagcctagacttcctcactagagtctga
DBGET
integrated database retrieval system
