Oncorhynchus tshawytscha (Chinook salmon): 112257548
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Entry
112257548 CDS
T05605
Name
(RefSeq) ARF GTPase-activating protein GIT2 isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112257548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257548
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112257548
Endosome - Golgi transport
Arf GTPase associated proteins
112257548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_5
Ank_4
TTRAP
DUF7783
K-box
Motif
Other DBs
NCBI-GeneID:
112257548
NCBI-ProteinID:
XP_024286964
UniProt:
A0A8C8I4I3
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All DBs
Position
LG09:complement(21144204..21164789)
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AA seq
746 aa
AA seq
DB search
MSKRLRSREVCADCSSQGPCWASVNRGVLICDECCSVHRGLGRHSSQVRHLTHTPWPPSQ
LQMVQKLYSNGANSIWEHSLLDPSSITSGKRKANPQDRVHPHKTEFIKAKYQMLAYVHRM
PCREDDSVTTKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNSPLHVAAKACQV
SQAELLAVYGADPGALDTGGKTPVDYARQAGHQELADRLVEIQYELTDRLAFYLCGRRPD
HRNGQHFIIPQMADRNVSLDLSEFAKAAKKKLQSLTNHQFEELAMDVYDEVDRRETDAVW
LVTQNHSTLVTDTTLVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILTDAKRRQR
GNSCESPREDIELILKGIGSRHGSDNQDNEDQPDYDSVASDEDPEREPASGKNGKDDRTK
SSESSDLSDGPITVQEFMEVKSALTASEAKIQQLLKVNCHLSEEIRMMQSKLNSLQTENS
TLQWQAPRGSQHPPDPSGHPSVHGGRPMSMYETGSGMRHYPHRGDPPCRADGLTIQPLPT
NIGRGPLGTASSSLPTFPSSLSWSRDERARRGCSLEGQSMLESDYDNTPNHSGLEESGLS
RNSSWLGDGSTSDQGEDETEADSTLPFTEDVICKTEQITKNIQELLRAAQENKHESFVPC
SERIHVAVREMATLFPKRPYSDTVRGSLRLLTSSASRLQGECQKATPHDPCPSDMQLVTQ
QVIQCAYDIAKAAKQLVTVTTKENSN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggctgcggagcagagaggtctgcgctgattgtagctcccagggcccgtgc
tgggcctcagtgaacaggggcgtgctgatctgtgatgagtgctgcagcgtccaccggggt
ctgggccgacacagttcccaagtccgacacctgactcatacaccatggccaccctcccag
ctacagatggttcagaaattgtacagcaatggggccaactccatctgggagcacagcctt
ctggacccctcgtctatcacaagtgggaaacgcaaggccaacccccaggacagagtccat
ccccataaaactgaattcatcaaggccaaatatcagatgctggcgtatgtccatcgaatg
ccctgtcgagaggatgacagtgtcaccacaaaggacctcagtaagcaactccactccagt
gttcggactgggaacctggagacgtgcttgagactgttgtctttgggagcccaggccaac
ttcttccacccggaaaaaggaaacagtccactgcatgtagcagctaaggcatgtcaggtg
tcacaagcagagctgctggctgtgtatggggcggatcctggtgccctagacacagggggt
aagacccctgttgactacgcaagacaagcaggccaccaggagctggcagacagactggta
gagatccagtatgaactcacagaccgcctggcattttacctctgtgggagaaggccagat
cataggaatggacaacacttcataatcccacaaatggctgacagaaatgtcagtctggat
ttgtcagaatttgcaaaagctgcaaaaaaaaaactccagtctctcactaaccatcagttt
gaagagcttgccatggacgtttatgatgaagtggacagaagagaaactgatgcagtgtgg
ctcgtgactcagaaccacagcactctggtaacagatacaactttggtgcctttcctccct
gtcaaccccgaatactcatccaccaggaaccagggcagacagaagctagcaaggttcaat
gcacatgaatttgcaacactcgtcattgatattttaactgatgccaaacgtcggcaacgg
gggaactcctgtgaaagtcccagagaggacatagagctcatcctgaagggaatcggcagc
cgtcatgggagtgataaccaggataatgaagaccaaccagattatgacagtgtggcgtca
gatgaagatccagagcgggaacccgcctctgggaagaacgggaaagatgacaggaccaag
agctcggagtcgtctgacctgtctgatggacccatcacagtacaggagttcatggaggtg
aagagcgccctcacagcctccgaggccaagatacagcagctgctcaaggtcaactgtcac
ctgagtgaggagatccggatgatgcagagcaagctgaactccctgcagactgagaactca
accctgcaatggcaggcccccaggggctcacaacaccctccggacccctctggccacccc
tctgtccacggaggccgccccatgtccatgtacgagacaggctcgggcatgaggcattac
ccccacaggggtgaccctccttgccgtgccgacggcctcactatacagcccctccctaca
aacattgggaggggtcctttggggaccgcctcatcctccctccctaccttcccctcctca
ctgtcctggtcgcgggatgaaagagctcgaaggggttgcagcctagagggacagagcatg
ctggagagtgactatgacaacacaccaaaccactctggactggaggagtccggtctgagc
aggaacagcagttggctgggggacggcagtacatcagatcagggggaggatgagactgag
gcagactccaccctacccttcaccgaggacgtcatctgtaagacagagcagatcaccaag
aacatccaggagctgctgagggccgcacaggagaacaaacatgagagctttgtaccatgc
tcagaaaggatccatgtggctgtgagggagatggccactctgtttcctaagaggccgtac
tctgacacagtgagagggtccctgcggctgctcacctccagtgccagccggctccagggg
gagtgccagaaggccacgccccacgacccttgcccctccgacatgcagctggtcacgcag
caggtcatccagtgtgcctacgacattgccaaggctgccaaacaactcgtcactgtgaca
accaaagaaaacagcaactga
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