Oncorhynchus tshawytscha (Chinook salmon): 112257551
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Entry
112257551 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112257551
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112257551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112257551
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112257551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
DUF2457
RRM_7
Nup35_RRM_2
RRM_9
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112257551
NCBI-ProteinID:
XP_024286972
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All DBs
Position
LG09:complement(21215208..21219469)
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AA seq
246 aa
AA seq
DB search
MTDGRIYVGNLPMDAQEKDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFDDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGEGGPRGRFGPPTRRSEFRVIVTGLPQTGSWQ
DLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDGTEFRSHQGETANIRVHGE
RGASYGRSRSRSRSPRGRGYSPPPYQSRGSPPQRYQSPPRRLVSRHSPPARRHPVPYHSP
PPRHYR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggacgcccaggagaaggacata
gaggatctcttcttcaaatatggaaaaatccgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgatgatccacgggatgcggaagacgcggtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggtgccaaatttagtggccctatgggagaaggaggtcctagggggaggtttgggccccca
actcggagatctgagttccgggtgatagtgactggcttgccccaaaccgggagctggcag
gatctgaaagaccacatgcgtgaggcaggggatgtttgtttcgccgacgtgcagcgagat
ggtgaaggagtggtggagtttgttcgtcgggaggacatggaatacgccctgcgcagactg
gacgggactgagttccgttcccatcagggagagacggcaaacattcgtgtccacggagaa
cgtggtgccagttacggtcgctcgcggtctcgctccagatccccccgagggcgtggctac
tcgccacctccttaccaaagcagagggtcccctccacagcgctaccagtcaccgccacgc
cgccttgtgtcacgccatagccccccagcaaggcgacacccagtaccgtaccatagcccg
cccccacgccactatcgatag
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