Oncorhynchus tshawytscha (Chinook salmon): 112257592
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Entry
112257592 CDS
T05605
Name
(RefSeq) titin homolog isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112257592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257592
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112257592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
112257592
NCBI-ProteinID:
XP_024287046
LinkDB
All DBs
Position
LG09:22486882..22523060
Genome browser
AA seq
1447 aa
AA seq
DB search
MSLSDQSRQCYPTSVQVTVVQARSLRIKGRNGTNDAYAIMQVAKDKFATSVAENSVAPVW
KEEATFELPLFYNGNTEKCTLHVHVMHRALVGPDKLLGQAVINLLELSEVKSRYKTEWHK
LLDKAGKPDKDRGEVQVDIQFMKNNMTASMFDLSATEKPHSRLGRFKDKVRGKKEGLSDT
ASAVVPSFTQVLTDSEGEGEGGTDKGETKKKNTLKSLFSPKSNLQCHGLSQSMSVLGPLP
EKNSSLSGSRSTGLNVDSSEGKNKFKFQTHKRTGSSLSLGRSKIPAQLAEQSNLCINGTH
MYTEEPQPRSARTVSNFSLASSGHGSMEDLRKAQGRKSSGTSMDSRALKQPSTWAEEEER
AMLDEERKKKEEQERKKLDEEERIRKEEQEKSRITEEEGEEMRLEEEQEERSLKVEGENS
IWKEDQEKWRLEEKRREMEEQERWEEEERIRREEHEIMRREDILRKEDERKIGEVEERLK
REKDERIKEEERIRREQEESMQRREEEERKMREEEERLRREQEDILRKIREEEMRGEERI
KREAEEKMKREENRVKEEERRRFEEEEGRMKREDDRLKEEEEEKKRRIEADEIMKREAEE
NMKREEDRVRRRREEEERRFEEEEGRMKREAEEERMKREEDRLRKEEEERRIEEEERVRK
TAEEDWLREEMGIKRMEEDKIFKIEEEDRLRKEEELRKIREKEERLRREEEEDDMWRNEE
EQRKMKNEEERRIEQEMLRKEEAERTRLEEEREEDRRRDEEQGKPMEAKERFRVDEENMK
KEDLRGPEEEMTEKEKKRNAQMEKKQRHEEVRVKLDKVEQPMKQNREAEATVCNNPFEEV
SPTTSCDDNSSNILFEETPTTSPTGPISCRTNKVSAVKQRPSSCVNPSQPSVSSNPFLSF
LSPEIESSMDSPRVDGEIRGTQDPSTDLMEKKDPAPLNQRWARMDNWPSKGNAQSVTVNL
ARTKTTKQPPPPIRQSSTSLVGCGDNQESVSGQDHSSIRMDKGPAPDRPSQAPSQTQREQ
SMTRVNLGHKDIGASMSKVSQRVVQMITPLRFSSTATTEHTSGGQSSTHHGNQPEQEMPS
ATGGLRVAKHNKGPAPSRPQYPPWKTMPKVDVIDKQLNTEEHDSLVEFDPNNPFAEDCRM
EKSSGHGEEQRLTGEYQESLDSPNHQSCTSIEANPGSMQNSVVRDSMGLPTTDVLLAEDG
SRPIKNSLAELVCVPLLPLKKTSISREEDTGKHSSVKLQSPGASSLSKLSSSISEKLQNR
GVGMALTCVTIAQPPCVPSPAPSILPQPKPLKGSGGRSNCPPQTSSLPGQRTLLQAGAMS
SVAEHCSGEEAGGRGDRPTSSTRRPHPVKPLSSLENQPASNIQERQAGISTGILGVLQEK
IKVKDTGVKVQYSQLTQEELISLVVKQQDQLSKRDNKIKELEQYIDNLLVRIIEEQPSIL
MSMNSLK
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcagaccagagccgacagtgttatccaaccagtgtacaggtaactgtggtt
caggcaagaagcctgaggataaaggggagaaatggcaccaacgacgcatacgccatcatg
caggtggccaaggataaattcgctacatcggtggcagagaatagcgtggcaccggtgtgg
aaagaagaggccacgttcgagctgccgctcttctacaacggtaacacagaaaagtgtacg
ttgcacgtccacgtaatgcaccgggctctcgtgggacctgacaagttgctcggccaagca
gtcatcaacctgttggagctcagcgaggttaaatcccgttataagactgaatggcataaa
ctgctggacaaggcaggcaagccagacaaagaccggggagaggtgcaggtggacatccag
tttatgaagaataacatgacagccagcatgttcgacctctctgctacagaaaagccgcac
tcccgcctgggaaggttcaaggacaaggtgcgaggcaaaaaggagggtctgtcggacact
gcatctgccgtggtaccgtccttcacccaggttctgacggacagcgagggagagggagag
gggggtacagacaaaggagagacaaagaagaaaaacacgctgaagtctctgttttctccc
aagtctaacctgcagtgtcacggactgtctcagtctatgtctgtcctgggccctctgcct
gagaagaactcctcattgagtggcagccgctccacaggcctcaatgtggactcctctgaa
ggtaaaaataaattcaagtttcagacccataagcgcacaggcagttctctgtccctaggg
cgctctaagattcctgcccagcttgcagagcagagtaacctgtgcatcaacggcactcac
atgtacacagaggagccccagccccggagcgcccgcaccgtctccaactttagcctggcc
agctcaggccatggctccatggaagacctgcgcaaggcccagggtcgtaagagctccggc
acctccatggactccagggccctgaagcagccttcaacctgggcagaggaggaagagagg
gctatgttggatgaggagaggaagaaaaaggaagagcaggagaggaagaagttagacgag
gaagagaggataaggaaggaggaacaagagaaaagcaggattacggaggaggagggggaa
gaaatgaggctagaagaggaacaggaggagaggagtctgaaggtggagggagagaacagc
atttggaaggaagaccaggaaaagtggaggttggaggagaaaaggagggaaatggaggaa
caagagaggtgggaagaagaggaaagaattaggagagaagaacatgaaataatgaggagg
gaggatatactgagaaaggaggatgagaggaaaattggggaggtggaggaaagattgaag
agggagaaagatgagaggattaaggaggaagaaaggattaggcgagaacaggaggagagt
atgcaaagaagagaggaagaggagaggaagatgagagaggaggaagaaagactaaggagg
gaacaggaggatatactgagaaaaataagggaggaggaaatgaggggtgaagaaagaata
aagagagaggctgaagaaaaaatgaagagggaggaaaacagagtgaaggaggaagaaagg
aggaggtttgaggaggaggaaggaagaatgaagagagaggatgataggctgaaggaggag
gaagaagaaaagaagaggaggattgaggcggatgaaataatgaagagagaggctgaagaa
aacatgaagagagaagaggacagagtgaggaggaggagggaggaggaagaaaggaggttt
gaggaggaagaaggaagaatgaagagagaggctgaagaagaaagaatgaagagagaggag
gataggctgaggaaggaggaggaggaaaggaggattgaggaggaagaaagagtgaggaag
accgcagaggaagattggctgagagaggaaatggggataaagaggatggaggaggacaaa
atatttaagatagaagaggaggataggctgagaaaggaggaagagctgaggaagattagg
gaaaaggaagaaaggctaaggagggaggaggaggaggatgatatgtggagaaatgaagaa
gagcagaggaagatgaagaatgaggaggaaaggagaatagagcaggagatgttgagaaag
gaagaagcagaaagaacgaggcttgaagaagaaagggaagaggatagaagaagagatgag
gagcagggaaaaccgatggaggcgaaagagaggtttagggtggatgaagaaaatatgaaa
aaagaggatttgagaggaccggaagaagagatgacagagaaggagaaaaagaggaatgca
cagatggagaaaaagcaaaggcatgaggaggtgagggtaaagttggacaaagttgaacaa
ccgatgaagcagaatagagaggcagaggccaccgtgtgcaataatccttttgaggaagtc
tctcctaccacttcatgtgatgacaactcttcaaatatcctgtttgaggagacccccaca
acctctcctactggtcccatcagctgccgaacaaataaagtatcagcagtcaagcagaga
ccctcttcatgtgtgaacccttctcagcctagtgtatcttccaaccccttcttatcattc
ttgtctcctgaaattgagagttctatggactcccctagagtcgatggggaaatcagaggc
acccaggacccgtctactgatctaatggagaagaaagaccctgcccccctcaaccagcgc
tgggctcgtatggacaactggcctagcaagggcaacgctcaatctgtcacagtgaatctc
gcccgaacaaagacaacaaaacagccacctcctccaatacgccaatcttccacgtcactg
gtgggatgcggggataaccaggagagtgttagtggtcaggaccattccagtatcaggatg
gacaagggtcctgctccagatagaccaagccaggctccaagccagacacagagggaacag
agtatgactagagtgaacctgggacataaggacataggtgcctccatgtccaaggtctct
caacgtgtagtacagatgatcacaccactgagattttcctccacagctacaacagaacac
acaagtggaggccagagctctacccaccatgggaaccaaccagaacaagaaatgccatct
gccactggggggttgagggtggctaaacacaataaaggtccagcaccttctaggccccag
taccctccatggaagacaatgccaaaagttgatgtaatagataagcaattgaatactgag
gaacatgactctttggttgagtttgatccaaataatccctttgcagaagactgcagaatg
gagaagtcctctggacatggtgaagaacagagactaactggtgaatatcaggagagccta
gactctcccaatcatcagagttgtacctccatagaagcaaatccaggttcaatgcagaat
agtgtggttagggactcaatggggcttccaacgacagatgttctgctagctgaggatggc
tcccgtcccatcaaaaactcattagcagagctggtctgtgttcccttgcttccattgaag
aaaacatccatctctagagaggaggatactggtaaacatagttctgtaaaactacaaagc
ccaggggcttcctctttgagtaagctttcctcaagtatctcagaaaaactgcagaatcga
ggtgtgggtatggcactaacttgtgttaccattgcccagcccccatgtgtaccctcacct
gccccctccatcctaccccaacccaagcccctgaagggatcagggggcaggagtaactgt
cctccccagacaagctctctccctggccagaggaccctgcttcaggctggagctatgtcc
tccgttgcagagcattgcagtggagaggaggcgggagggagaggggacaggcctacctca
agcacacgcaggccccatccagtaaagcccttgagctccctggaaaaccagccagcctcc
aacatccaggagaggcaggctggcatatctacaggaatcctcggtgtccttcaagagaag
ataaaggtcaaagacacaggggtcaaagttcagtactcccagctgacccaggaggagctg
atctccctggtggtgaagcagcaggaccagctctccaagagggacaacaagatcaaggag
ctggagcagtacattgacaacctgctggtgcgcatcattgaggagcaacccagtatcctg
atgtccatgaactcactcaaatga
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