Oncorhynchus tshawytscha (Chinook salmon): 112257607
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Entry
112257607 CDS
T05605
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112257607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112257607
03012 Translation factors [BR:
otw03012
]
112257607
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112257607
Translation factors [BR:
otw03012
]
Eukaryotic type
Release factors
112257607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
112257607
NCBI-ProteinID:
XP_024287071
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All DBs
Position
LG09:complement(23141148..23148827)
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AA seq
446 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYHKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAATLFLCNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLTNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKAMEMGAVEILIVYENLDTMRYILRCHGAEGLAMAEKGTDEKTLYLTPEQE
KDKSHFTDKETGQDHELIESLPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcggataggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggcacgagtatgatatccctgatcatccca
cctaaggaccagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aacattaaaagcagagtcaacaggctctctgtgcttggagccatcacatctgtacagcag
agactcaaactctaccataaagtgcctcccaacggcttggttgtgtactgtggcaccatt
gtgactgatgagggcaaagagaaaaaagtcaatattgactttgagccttttaaaccaatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagcattgctc
tcagatgacagcaagtttggtttcattgtgattgatggaagtggcgccctcttcggaacc
ctacagggcaacaccagggaggtgctgcataagttcacagtggacctacccaagaagcac
ggcagaggaggacagtctgccttgcgttttgctcgtttgaggatggagaagagacataac
tacgtgcggaaggtggcagagacggcagccacgctttttttgtgcaacgacaaggtcaac
gtagcaggcatggtcttagctggttcagctgacttcaagacggagctcagccagtcagac
atgtttgacccgaggcttcaagctaagatcctgaagctggttgacatatcatatggtggg
gagaatggcttcaaccaggccattgaactgtccgcagaagtgcttaccaatgtcaaattc
atccaggagaagaaactaataggacgatactttgatgagatcagccaggatacggggaag
tactgctttggggtggaagacacactgaaagccatggaaatgggtgctgttgagatcctg
attgtttatgagaacctggataccatgagatacatcctacgttgccatggagcagaggga
cttgctatggcggagaagggtaccgatgagaagacgttgtatttgacgccagagcaggag
aaagacaagtctcacttcacagacaaagagactggtcaggaccatgagctgatcgagagc
ttgccattacttgaatggttcgccaatagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtaaaaggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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