Oncorhynchus tshawytscha (Chinook salmon): 112257627
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Entry
112257627 CDS
T05605
Name
(RefSeq) vascular endothelial zinc finger 1 isoform X1
KO
K26610
vascular endothelial zinc finger 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112257627
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
112257627
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-WRNIP1_ubi
DUF7565
Zap1_zf1
zf-BED
zf-Di19
zf-C2H2_jaz
GerE
zf-C2H2_16
UBZ_FAAP20
zf_C2H2_13
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-GeneID:
112257627
NCBI-ProteinID:
XP_024287110
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All DBs
Position
LG09:25543851..25560539
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AA seq
468 aa
AA seq
DB search
MEPSWSTFLFQQANEALHHQHQVAQNSLLPLLNSGNEPVDQKPVMPIPLDQKPPASAAEL
LKDNVASGAGGGRGPMPVVKKEHKSKTPFICGYCNKAFRDSYHLRRHESCHTGIKMVSRP
KKTAQTAPTMVPFISSLPRENSGQPSYISTIAGILTTATTSVSSASSIMSPVSMINVPQQ
SQPKKPAKPVKKNHGCEMCGKAFRDVYHLNRHKLSHSDEKPFQCPICQQRFKRKDRMTYH
VRSHDGGVHKPYVCSVCGKGFSRPDHLSCHVKHVHSSERPFKCQVTACTSAFATKDRLRS
HMIRHEGKVTCNICGKMLSAAYITSHLKTHGQTNFNSCSKGDWQWNSSGGRKDNDIHNSA
SATPVTASAPITTTMNRGNSINNPVTIAAQMNISTNTVNVSLQHPVTITGPVNIASVNIP
TTAHMNIAHPLAISTPMSMTMSGPLNIAMRSMESMSFLSQVLPSSPPW
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagctggagtacatttctatttcagcaggccaatgaagccctccaccaccag
caccaggtggcccagaacagcctgctgccactgctcaactctggaaatgagccggtggac
cagaagcctgtgatgcccatccccctggaccagaaaccccccgccagtgccgcagagctc
ctcaaagacaacgtggccagcggggcaggtggcggcaggggacccatgcccgtggtgaag
aaggagcacaagagcaagacacccttcatctgcggctactgcaacaaggccttccgtgac
agctaccacctgcggcgccacgagtcctgccacacgggcatcaagatggtgtcgcggccc
aagaagacggcccagacggcccccaccatggtgcccttcatctccagcctgcccagggag
aacagtgggcagccctcctacatctccaccatcgcaggcatcctcaccacggccaccacg
tccgtgtcctcagcctccagcatcatgtctccagtctctatgatcaacgtgccgcagcag
agccagcccaagaagcctgccaagcctgtgaagaagaaccatggctgtgagatgtgtggc
aaggccttccgagacgtctaccacctgaaccgtcacaagctgtcccattcggacgagaag
cccttccagtgccccatctgccaacagcgcttcaagaggaaggaccgaatgacataccat
gtgcgctctcacgacggtggagtccacaagccatacgtctgctctgtgtgtgggaaaggc
ttctccaggccagaccacctgagctgccacgtgaagcatgtccactcctcagaaagacca
ttcaaatgccaagtaacggcctgtacttctgccttcgccaccaaagacagactgcgctcc
cacatgatccgacatgaagggaaggtcacctgcaacatctgcggcaagatgctgagcgca
gcctacatcaccagccatctaaagacacacggccagaccaactttaactcctgtagcaaa
ggggactggcagtggaactcctcagggggacgaaaagataatgacattcacaactctgcc
tcagccacacctgtaacagcctccgcccccatcaccaccacgatgaaccggggcaactcc
atcaacaaccctgtcacaatagcggcgcaaatgaacatttccaccaatacagttaacgtt
agcctccaacacccagtcaccatcactgggcccgtcaacatcgcctcggtcaacatccct
accacggcacacatgaatatcgcccaccctctggccatcagcacccccatgtccatgaca
atgtccgggcccctcaacattgccatgagatccatggagagtatgtcttttctgtcccag
gtcctgccttcgtccccaccctggtaa
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