Oncorhynchus tshawytscha (Chinook salmon): 112257639
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Entry
112257639 CDS
T05605
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112257639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112257639
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112257639
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
CSD
Motif
Other DBs
NCBI-GeneID:
112257639
NCBI-ProteinID:
XP_042182639
LinkDB
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Position
LG09:25758393..26190827
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AA seq
427 aa
AA seq
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MEGDGSQVTSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSEYGPTLLQHSPAHYSVPHGYPN
IVATYGRGYTGFTPSYSYQFPGFPATAYGPVAAAAVAAARGSGRGARGKGGYMAYPQNTG
PGFHDYGFYSAPSDQRGAPCSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKS
PGGNPARPGGFPGANSPGPVADLYGPGGQDSNVANYISAASPQAGSGFGHSIAQSLSGGP
GKTDRTF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagttacatctggaagcccaaatgattcacaacatgacccg
ggtaaaatgtttattggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagcaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgt
tccagaggatttggattcgttacgtttgcagatgctgccagtgtagataaagtcttagct
caaccacaccacgaattagactcaaagacgattgatcctaaggttgccttcccccgacgc
gctcaacccaagatggtcacaagaacaaagaaaatatttgtgggcggattgtcagccaac
acagtggtggaagatgtgaagcagtattttgaacagtttgggaaggtagaagacgccatg
cttatgtttgataaaacgactaacagacatagaggatttggcttcataactttcgagggc
gaagacgtcgtagagaaagtctgtgaaattcattttcatgaaatcaacaataaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggcacgcgagggagggcc
aggggcctgccctacaccatggatgccttcatgctggggatgggcatgctgagtgagtat
ggaccaacactactccagcacagtccagcacattactcagtcccacacggttacccgaac
attgtggcaacatacggtcgtggatacactggattcacccccagttacagctatcagttc
cctggtttcccggcgacggcgtacggaccggtggcggcagcggcggtggcagcagcgcgt
ggctcaggtaggggggcccgaggaaaaggcggctacatggcgtacccgcagaacacaggg
ccaggctttcacgattacgggttttactctgcgcccagtgaccagaggggggcgccctgc
tcctttgcggactatggctccctggggccccaggcggctcagatgctgcacagtgagcat
gccacctccgcctgcaactcccccctccagcacctgcacagcccggatcagtttaagagc
ccagggggaaacccagctcgtcctggaggcttcccaggtgccaacagcccagggcctgta
gccgacctgtacggccctggaggccaggactccaatgtggctaactacatcagtgctgct
agcccacaggctggctccggcttcggccacagtatcgcacagagtctatctggtggtcca
gggaagacagaccgaaccttctaa
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