Oncorhynchus tshawytscha (Chinook salmon): 112257648
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Entry
112257648 CDS
T05605
Symbol
npas2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112257648 (npas2)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112257648 (npas2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
bHLH_IRO3
PAS_9
TED_2
Motif
Other DBs
NCBI-GeneID:
112257648
NCBI-ProteinID:
XP_042182649
UniProt:
A0A8C8FLY7
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All DBs
Position
LG09:26403785..26448721
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AA seq
880 aa
AA seq
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MDNLSDFGSLCPSSRREWDTSSCVDDLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTINFLQTQKEITAQTESCEIRQDWKPSFLSNEEFTQLMLE
ALDGFLIALTTDGNIIYVSDSVSSLIAHLPSDMVDQNILNFLPEREHGEVYKLLSSHMLM
TDPISADFLDSKTHIEFCCHLARGNIDPKEPPTYEYVKFVGDFKFHNNVPTSSCNGFELT
LPRTLQSSLEEQVCLVATVRLVTPQFLKDLCNVEDPCDEFTSRHSLEWKFLFLDHRASPI
IGYLPFEVLGTSGYDYYHVDDLELIARCHKQLMQFGKGKSCYYRFLTKGQQWIWLQTHYY
ITYHQWNSKPEFIVCTHTVVSYAEVRAERRREFGLEETSPEMATSSSIKAQKVYLDICPN
LEPPGQDRMSGACSVSSHSSRKSSHTALSDSASNTSLRFTDACTPSRQSASVAGTEKNLA
RLVPSSAKTLVQRQNSFDLLPQLSLPPSPTCSQHSVMQQQQQQQQQSMYQQQPQEPQLGV
MNQLKEQLEERTRILQMDIKTQQQELHDIKEKLQLANLQMLLQQPIHGDFGQVQQQQPQQ
QGPGRPVQQPQPQSRVIRQASAHSKQPLHGAHDSSPHSLLREHSTPSPQVQQRLIRNAGG
QMQAVSLPVHTHTSLTMPFYSNPMMFSQQMNTQPLQDANQRHSDTEFSQEGQLRMLLNQP
MHTLLPDSSMSSQTSQCNTAIQQTKYSLEQQMMTPSFPMQQVNCNAVLVPSPVFTSPIMI
PHNSFITHQAQPTYHPQQQANHHSLQLQQPQQFFQMQPQGLLHSGPTQAFFHATNIPQQG
TVGYIQQQPQQQQPQQQQQQHHHSQNQTGNLSDFRNMLTR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctttccgactttgggtccctatgtccgtctagccgaagggaatgggacacc
agcagctgtgtggacgatttgatggatgaagatgagaaagacagggcaaaaagggcatct
cgtaacaaatcggaaaagaaaagaagagaccaattcaatgtgctcatcaaggagctgtgc
accatgctgcagggccaaggtcatccgcgcaagatggacaagtccaccatactgcagaga
acgatcaacttcctgcagacacagaaagaaataacagcacagaccgagtcgtgtgagatc
cggcaggactggaagccttcgttcctcagtaatgaggagttcacccagttgatgctagag
gctttagacggtttcctcatagcactaactacagatggaaacattatatatgtgtccgac
agcgtgtcttcactcattgcccatttaccgtcagatatggtggaccaaaatatcttgaac
tttctccctgagcgtgagcatggggaggtctataagctgctatcatcccacatgctgatg
actgaccccatctctgctgacttcctagacagtaagacacacattgagttctgctgtcat
ttagccagaggaaacatcgacccaaaggaaccccctacatatgagtatgtgaaatttgta
ggagatttcaagtttcataacaatgtgcctacttcctcttgtaacgggtttgagttgaca
ttaccaagaacactgcagtcatcactggaagagcaggtctgccttgttgccactgtacga
ttagtcactccgcagtttttaaaggatttgtgtaatgtggaagatccctgtgatgaattc
acatccagacacagccttgaatggaagttcctgttcttagatcacagagcttcaccaatc
atcggctacttgccctttgaggttcttgggacttctggctatgattactatcatgtggat
gacttggagcttatagcgcggtgtcataagcaattaatgcagtttgggaagggtaaatcc
tgctactatcggtttctgaccaagggtcagcagtggatctggctccagacacactactac
attacataccaccagtggaactccaagccagagttcatagtgtgcactcacacagtcgtc
agttacgcggaggtgagagcggagaggaggagagagtttggcttggaggagacgtcacct
gagatggccacttcgtcctccataaaggctcagaaggtgtacctggacatctgtcccaat
ctggaacctcccggacaggacaggatgagcggggcatgctcagtgtcctcccacagctcc
cggaaatcctcccacacagccctgtccgactcggcatccaacacatccttgcggttcaca
gacgcttgcacaccatcacgacagtctgcatcagtcgcggggacagagaagaatttggcc
agactcgtacccagtagtgcaaagactttggtacagaggcaaaactcttttgacctcctt
ccccaactgagcctacccccttctcctacctgcagccagcactccgtaatgcaacaacaa
caacagcagcagcagcagtccatgtaccaacagcagccccaagagcctcagctaggtgtg
atgaaccagctcaaggagcagctggaggagaggacacgcatcctgcagatggacatcaag
actcagcagcaggagctgcatgacatcaaggagaagcttcagctagctaacctccagatg
ttgttacagcaacccatccacggtgactttggccaggtccaacagcagcagcctcagcag
cagggtccagggaggccggtccagcagcctcagcctcagtctagggtgatcagacaggcc
tcggcccactccaaacagcctctccatggagcccacgactcgtcccctcactctctcctc
agagagcacagcacaccctcccctcaggtgcagcagagattgataaggaatgcaggcggg
cagatgcaggcagtcagtctcccggtgcacacccacaccagcctgaccatgcccttttac
agcaaccccatgatgttctctcagcagatgaacacacagccactgcaggacgcaaaccaa
agacactcagacaccgagttcagtcaagagggacagttacgcatgctgctcaaccagcca
atgcataccctcttacctgatagcagtatgagctcccagacttcccagtgcaacacagcc
atccagcaaaccaaatactccctggagcagcagatgatgaccccgtcgttccccatgcag
caggtgaactgcaacgctgtcctggtcccctcccctgtattcacgtcccccatcatgatc
cctcacaacagctttatcacgcaccaggcccagcccacctaccaccctcagcagcaggcc
aaccatcactctctacagctgcagcagccccagcagttctttcagatgcagccccaagga
ctcttacacagtggacccactcaggcgttcttccacgccactaatatcccacagcaaggt
actgtgggttatattcaacaacaaccgcagcagcagcaaccacaacaacaacagcaacaa
caccaccattcccaaaaccagactggcaacctttcagacttccgaaatatgctcactcgg
tag
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