Oncorhynchus tshawytscha (Chinook salmon): 112257671
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Entry
112257671 CDS
T05605
Name
(RefSeq) oligophrenin-1 isoform X1
KO
K20650
oligophrenin-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257671
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112257671
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BAR_3
RhoGAP
PH
Arfaptin
PXA
Motif
Other DBs
NCBI-GeneID:
112257671
NCBI-ProteinID:
XP_024287196
LinkDB
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Position
LG09:27197862..27247677
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AA seq
819 aa
AA seq
DB search
MRCSCTAFYKQVMGHPPLEFSDCYGDSPDFRERLKCYELELERTSKFLKDVIKDGNSVIN
AIKGYSVAVHKFSQTLNVFQFDFIGDSLTDDEINIAESFQEFAGLLQEVEDDRMMLVQNA
CDLLIKPLEKFRKEQIGVTKERRKKFEKESEKYYSQLDKHLNLSAKKKETQLQEADELLD
KERLNFYESSVEYVYQIQQVQDRKKFDVVEPVLAFLHSILTLNNLTVEMTQDFMPYKQEL
QLSLQNTRNHFESTREEMEELMKRMKHPTQIGKMHGQPTIEGYLYSQEKWALGVSWVKYY
CKYHKASKLFVMVPAEPKPATKQGPTELKLKSCFRRKTESIDKRFCFDIETYERNIPVTL
QAVSEANRKLWMEAMDGKEPIYHSPIHKQAEMELNEVGFKFVRKCINFVETKGLTQEGVY
RTVGSNIQVQKLLNAFFDQKCPGDVDFHSSDWDIKTITSAMKFYLRSLTEPLMTYGLNRD
LILAAKSDSLDDRLGAIHSLTYKLPEKNREMLSLLIEHLVNVCSNSGDNLMTPSNMGVIF
GPTLMRAEEETVAAMLDIKFQNIVVEILIEDYTKIFCTAPEESSTAPPMPPPRITPRKRQ
PITISKRTPRVYPAVNYGQLQNIENDQNGSRPEGVEAGRDTPTSPTPLQRTKPITAPPRL
PREPPQRQALLPRPSIRQDRHSDSNVVKLVAKLPDGGQRPDATANGETGVTVNRAQSFQG
RRPPRSVAVIREAENDGVIKTRSPAEKPAICRPPTRPPDPPSRYPAPHKSPTATPSEDTP
ASYVASKAKFFENASRKFGSSSVSPPASTLLNVKEENLS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagatgcagctgcacagcattttacaaacaagtaatggggcatcctccgcttgagttc
agcgactgctatggagatagtccggattttagagaaagactaaaatgctatgaattagaa
ttggaaagaacaagcaaatttctcaaagatgtcatcaaagatggcaacagtgtaatcaat
gcaatcaagggttattctgtggcagttcataagttctcccaaacactcaacgtgttccag
ttcgacttcattggtgattccctgacagatgacgagattaatattgcggaatctttccaa
gagtttgctggtctcctacaggaagtggaggatgaccggatgatgctggttcagaatgct
tgtgatctgcttatcaagccactggagaagtttcgcaaggagcaaataggagtgacaaaa
gaaagaaggaagaagtttgagaaagaaagcgaaaaatattactctcagttagataaacat
ctgaatttgtctgctaagaagaaggaaactcagctgcaggaggctgacgagctgctggac
aaagagaggctgaacttctatgagtcgtcagtggagtatgtgtaccagatccagcaggtg
caggaccgaaagaagtttgatgtggtggagcctgtgctggcatttcttcacagtatccta
acactcaacaatctgacggtggagatgactcaggacttcatgccctataagcaggagctg
cagctcagcttgcagaatacgcggaaccacttcgagagcactcgtgaggagatggaggag
ctgatgaagagaatgaagcatccaacccagatcggcaaaatgcacggccaaccaaccatt
gagggctacctgtactctcaggagaagtgggccttgggtgtgtcatgggtcaagtactac
tgcaagtatcacaaagccagcaagctgtttgtcatggtccctgctgaaccaaaacccgca
accaaacagggccccacagagctgaagcttaaatcctgcttccgccgaaagacagagtcc
atagacaagcgcttctgctttgatatcgaaacttacgagagaaacatacctgtcactctc
caggctgtttcggaggccaacaggaagttatggatggaggccatggatggaaaagagcct
atttatcattccccaattcacaagcaagctgaaatggaattgaatgaagttggattcaag
tttgtaagaaaatgcattaacttcgttgaaactaaaggactcacacaagaaggagtatac
agaactgttggcagtaacatccaagtgcagaagcttttaaatgctttctttgaccagaaa
tgcccaggggatgtggatttccacagcagtgactgggacattaaaaccatcacaagtgcc
atgaagttttatctccggagtttaacagagcctctgatgacctacggtctcaacagggac
ctcatcttagcagcaaaatcagatagtctagatgatcgactgggtgcaatccactccctg
acatacaaactcccagagaagaatcgagaaatgttaagcctactgatcgaacacctggtg
aatgtctgcagcaacagtggagacaacctgatgactccctccaacatgggcgtgatcttt
ggccccaccctcatgagggcagaggaagagactgtggcagccatgttggatataaagttc
cagaacattgttgttgagattctaatcgaggactacaccaagatcttctgcactgcgcca
gaggagagttccacagccccacccatgccgcctccaaggattaccccaaggaaacggcaa
ccaatcaccatctccaagcgcacgccccgcgtctacccagcagttaattatggccagctc
cagaacattgagaatgatcagaatggtagcagaccagagggagtggaggctggcagggac
accccaacgagccctacacctctccaaaggaccaaacccataactgcccctccacggctc
cctcgggaacctcctcagaggcaggccctcctgcccaggccatccatccgccaggacaga
cactcagactctaacgtcgtcaaactggttgctaagctaccggatggaggtcagaggcca
gatgcaacagccaatggagagactggagtcactgttaaccgagcgcagtccttccaaggc
agaagaccacctcgaagtgttgcggtcattcgagaagcagaaaatgacggtgtgatcaaa
acgaggtctccagctgagaagcctgccatctgcagacctccaaccagaccccctgacccc
cctagccgataccctgcaccccacaagagccccactgcaacccccagcgaggacaccccg
gcgtcgtacgttgcttccaaagccaagttttttgagaatgcttcaaggaaatttggaagc
tcatcggtctcacctccagcatctactttgctcaatgtgaaagaagagaatttaagttga
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