Oncorhynchus tshawytscha (Chinook salmon): 112257710
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Entry
112257710 CDS
T05605
Name
(RefSeq) ras-related protein Rab-4B-like
KO
K07880
Ras-related protein Rab-4B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257710
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112257710
04031 GTP-binding proteins [BR:
otw04031
]
112257710
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
112257710
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112257710
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
112257710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
cobW
AAA_7
SRPRB
AAA_29
P-loop_TraG
ATPase_2
Septin
AAA_16
NACHT
AAA_22
ATPase
G-alpha
AAA_14
ADDB_N
DUF3849
Motif
Other DBs
NCBI-GeneID:
112257710
NCBI-ProteinID:
XP_024287261
UniProt:
A0AAZ3S7B1
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All DBs
Position
LG09:28319820..28326842
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AA seq
214 aa
AA seq
DB search
MTETYDFLFKFLVIGSAGSGKSCLLHQFIENKFKQDSSHTIGVEFGSRVVMVAGKTIKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCG
NKKDLEADREVTFLEAARFAQENELMFLETSALTGENVEEAFLKCGRTILNKIDSGELDP
ERMGSGIQYGDTTVRQLRQSPQAGSAQGRDQCNC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacgtatgatttcctttttaaattcttggtgattggaagtgcaggatcaggg
aaatcctgtcttctccatcaatttatagaaaacaagttcaagcaggactccagccacacc
attggggtggagtttggctcccgggtggtgatggtcgccggtaagacgatcaagctgcag
atctgggacacagctggacaggaacgattccggtcagtgactcgcagttattacagaggg
gcagcaggggctctcctggtttatgacatcaccagtcgggaaacgtataatgccctgacc
aactggttgacagacgctcgaacgctggccagtccaaacattgtcatcatcctgtgtggg
aacaagaaagacctggaggctgacagagaggtcaccttccttgaggcagcccgcttcgcc
caggagaacgaactgatgttcctggagacgagtgccctcaccggagagaatgtggaggag
gccttccttaaatgtggtcgcaccatcctcaacaagatagattcaggtgagttagacccg
gaacggatgggctcagggatccagtatggtgatacaacggtgagacagcttcgccagtcg
ccacaggctggctcagcacagggcagagatcagtgcaactgttaa
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