Oncorhynchus tshawytscha (Chinook salmon): 112257712
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Entry
112257712 CDS
T05605
Name
(RefSeq) ras-related protein Rab-6A isoform X1
KO
K07893
Ras-related protein Rab-6A/C/D [EC:
3.6.5.2
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257712
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112257712
04031 GTP-binding proteins [BR:
otw04031
]
112257712
Enzymes [BR:
otw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.2 small monomeric GTPase
112257712
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
112257712
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
112257712
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112257712
Exosomal proteins of bladder cancer cells
112257712
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
112257712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
SRPRB
RsgA_GTPase
FeoB_N
Gtr1_RagA
ATP_bind_1
CPT
DUF1854
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
112257712
NCBI-ProteinID:
XP_024287263
LinkDB
All DBs
Position
LG09:28537204..28564052
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AA seq
208 aa
AA seq
DB search
MTAAGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
IMLVGNKTDLADKRQVAIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
QDKSREDMIDIKLEKPPEQPISEGGCSC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggcaggagatttcggaaaccctctaaggaaatttaaattagtctttcttggc
gagcagagcgtggggaagacctcattgattaccaggttcatgtacgacagcttcgacaac
acctaccaggccacaataggaatagattttttgtctaaaaccatgtacctcgaagacaga
acagtgagactgcagctttgggacacagccggccaggagcgcttccggagtctgatccct
agctacatacgagattccaccgtggctgtggtagtctatgacatcacaaacgtcaactct
ttccagcaaaccacaaaatggattgatgatgtcagaacggagagaggaagtgatgtcatc
atcatgttggtgggaaacaagactgaccttgcagacaaaaggcaagttgctattgaagag
ggtgagaggaaggccaaagagctaaatgtaatgtttattgagactagtgctaaagcagga
tacaacgtcaagcagctgttccgacgcgtggccgctgccctccctggcatggagagcaca
caggacaagagcagagaagacatgattgacataaagctggagaagcccccagaacagccc
atcagcgaaggaggctgctcctgctaa
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