Oncorhynchus tshawytscha (Chinook salmon): 112257728
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Entry
112257728 CDS
T05605
Name
(RefSeq) unconventional myosin-Ic isoform X3
KO
K10356
myosin I
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112257728
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112257728
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257728
03036 Chromosome and associated proteins [BR:
otw03036
]
112257728
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112257728
04147 Exosome [BR:
otw04147
]
112257728
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112257728
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Others
112257728
Others
Actin-binding proteins
Myosins
112257728
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112257728
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112257728
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112257728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
IQ
AAA_16
AAA_22
Zeta_toxin
TniB
Sigma54_activat
TsaE
Motif
Other DBs
NCBI-GeneID:
112257728
NCBI-ProteinID:
XP_024287284
LinkDB
All DBs
Position
LG09:28978419..29012905
Genome browser
AA seq
1028 aa
AA seq
DB search
MESTLTARDRVGVQDFVLLENYTSEAAFIENLRRRFGENLIYTYIGSVLVSVNPNKDLEI
YSKAHMERYRGVSFYEISPHIYAVSDNTYRAMRTERRDQCILISGESGAGKTEVSKKILQ
YYATTCPVTDHLSTLRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFRGAPIGG
HILNYLLEKSRVVHQNHGERNFHIFYQLLEGGEQDLLSKLGLERNAQKYQYLVKGCCPRV
SSINDKNDWRTVRKALTVIGFHEDEVEDLLNIIASVLHLGNTQFGEGKNGENQITTEPQL
KYLSKLLGVDGAALREALTHKKITAKGEEMISPLSFEQAVAARDALAKAVYGRTFTWLVV
KINQSLAFKDDVYNSSKGSSSVIGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTL
KSEQEEYEAEGITWEPVKYFDNKIICDLVEGKHKGLISILDEECLRPGEPSDISFLEKLE
DTLGGHAHFVTHKLSNGKTRKAVSREEFKLIHYAGEVNYSVNGFLDKNKDLLYRNLKEVI
CQSNCQVLSQCFHREEVTDQKRPETAATQFKNSLAKLIEILMSKEPSYVRCIKPNDAKQS
GRFDEALVRHQVKYLGLMENLRVRRAGFAYRRHYETFLQRYKSLCPRTWPNWQGRLADGV
ATLVQHLGYKPEEYKLGKTKIFIRFPKTLFSTEDSLEARRPALVLTLQTSWRGYRERAKY
LRIRQAVIVIQSAWRGMISRQKARRRRHAVDIIRKFIKGFIYRHYERCPENEYFLDHQRF
SFLMMLFRNPPKSVLDKSWPIPPPCLTEASEHLCRLCMRNMMRAYCRRIQPEWKKQMEQK
VVASQIFKDQKDSYPQSVPKLFVASRLNSEEFNLKVIQTLGNDKVKYGIAVTKYDRRGYK
ARPRQLLLTSSFAMLVAEAKLKQRIDYATLRSISVSSLSDGFMVLHVPSEDNKQKSDVVL
QCDHLIEVVTKLATMADKKIKVNMSQDSITFAVARGKEGVIDFTSGPELKVAKCKKGHLL
VTAPKLNP
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggagagtactctgacagcacgtgacagggtgggggtgcaggactttgtcctgctggag
aactacaccagcgaggcggccttcatcgaaaacctgcgccgacgttttggggagaacctc
atctatacctacataggatcagtgttggtgtcagtgaaccccaacaaggacctggagatc
tactccaaggcgcacatggagcgctaccgaggggtcagcttctacgagatatcaccccac
atctatgcggtgtcagacaacacgtaccgggccatgcggactgagaggagggaccagtgt
atcctgatctctggggagagcggagcagggaagaccgaggtctctaagaagatcctccag
tactacgctactacctgccctgtcactgaccacttgagtacgctccgggaccgcctgctg
cagtccaaccctgttctggaggcttttggtaatgccaaaacactgcgtaatgacaattcc
agccggtttggcaaatacatggatgtccagtttgacttcaggggtgcgccgataggaggc
cacatcctcaactacctgctggagaagtcccgtgttgtgcaccagaaccacggcgagagg
aacttccatattttctaccagctgctcgagggaggagaacaagaccttctcagcaagctg
ggattggagagaaacgcccagaaataccaatacctggtcaagggttgctgtcctagggtg
agctccatcaatgataagaatgactggagaacagtgaggaaggccctgactgtcatcggc
ttccatgaggatgaggtggaggatctgttgaatataatcgccagtgtcctccatcttggg
aacactcagtttggagaaggaaagaatggggaaaaccagatcaccactgagcctcagctc
aaatacctgtccaagctgttaggtgtggatggagcagcactgagagaggctctcactcat
aagaaaatcactgccaaaggggaggagatgataagcccgttgagttttgagcaggctgtg
gcagcccgtgatgccttggccaaagcggtatatggccgtaccttcacttggctggtggtg
aagatcaaccagtctctggcattcaaggatgatgtgtacaacagcagtaagggctcatca
tcagtcataggactgctggatatctatggctttgaggtcttccagcacaatagttttgag
cagttctgcatcaactattgcaatgagaagctgcaacagctgttcattgagctcaccctc
aagtctgagcaggaggagtacgaggcagagggcatcacttgggaaccggtgaagtacttc
gacaacaagataatctgtgacctggtagagggaaagcacaaaggcttgatctccatcctg
gatgaggagtgtttgagaccaggggagcccagcgatatctccttcctcgagaagcttgag
gacactttgggaggccatgcccattttgtcactcacaagttgtcgaatgggaagactcgc
aaggcagtgagcagagaggagttcaaactgattcattatgcaggagaggtcaactacagt
gtcaatgggtttctggacaagaacaaggaccttctctacagaaacctgaaagaggtcata
tgccagtcaaattgccaggttttgagtcagtgcttccacagagaggaagtgactgaccaa
aaacgcccagaaacggctgccactcagtttaagaacagcctggccaaacttatagagata
ctgatgtccaaggagccatcctatgtgcgctgtatcaaacccaacgatgccaagcagtca
gggaggtttgatgaggctctagtcagacaccaggtcaagtatctgggtctgatggagaac
ctgagggtcaggagagctgggtttgcctaccgccgacactacgaaaccttcctacagagg
tacaagtctctgtgtcccaggacatggcctaactggcagggcagactggctgatggagta
gccactctggtccaacacctgggctacaaaccagaggaatacaaactgggcaagaccaag
atcttcatccgcttccctaagactctgttcagcactgaagattccctggaagccaggagg
cctgccctcgttctcaccctacagacctcatggaggggttacagagagagggccaagtac
ctccgcatcagacaggcagtcatagtgatccaatctgcgtggagagggatgatatcccgt
cagaaggccaggcgtcgcagacacgctgtggacatcatacgcaagttcatcaaaggcttc
atctaccgccactatgagcgttgtccagaaaacgagtacttcctggaccatcagcgtttc
tccttcctgatgatgctgtttaggaacccacctaagagtgtcctggacaaaagctggccc
atccccccaccttgcctcactgaggcgtcagagcacctgtgcaggctgtgtatgcggaac
atgatgcgggcctactgcaggaggatccagccagagtggaagaaacagatggagcagaag
gtagtagccagtcagatattcaaggaccagaaggacagctatccccagagtgtccctaag
ctgtttgtggcctccagactaaacagtgaggagttcaacctcaaagtgatacagactctg
ggcaatgacaaagtgaagtatggaattgcggtgactaagtatgataggaggggttacaag
gcacggcctcgccagctgctcctcacctcctccttcgccatgctggtggccgaagccaag
ctgaagcagaggatcgactatgcaaccctgaggagcatctctgtgagttctctcagtgat
gggttcatggttctccacgtgcccagtgaggacaacaagcaaaagagtgatgtggtgctc
cagtgtgatcatttgatcgaggtggtgaccaagctggccactatggcggacaagaagatc
aaggtcaacatgagccaggacagtattacgtttgcagtggctcgggggaaagagggagtc
attgacttcaccagtggaccagagctgaaggtggccaaatgcaagaaaggacacctgcta
gtgacggctcctaaactcaacccgtga
DBGET
integrated database retrieval system
