Oncorhynchus tshawytscha (Chinook salmon): 112257740
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Entry
112257740 CDS
T05605
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00061
Fatty acid biosynthesis
otw00071
Fatty acid degradation
otw01100
Metabolic pathways
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04146
Peroxisome
otw04216
Ferroptosis
otw04920
Adipocytokine signaling pathway
Module
otw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112257740
00071 Fatty acid degradation
112257740
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112257740
09143 Cell growth and death
04216 Ferroptosis
112257740
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112257740
03320 PPAR signaling pathway
112257740
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112257740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112257740
Enzymes [BR:
otw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112257740
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112257740
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112257740
Exosomal proteins of breast cancer cells
112257740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112257740
NCBI-ProteinID:
XP_024287308
UniProt:
A0A8C8K598
LinkDB
All DBs
Position
LG09:29298142..29318011
Genome browser
AA seq
710 aa
AA seq
DB search
MRFKVDMHYIVFSPVYLLMWLYTLITFIPWYFLTDAGKKKTMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNTDCLGTRELLNEENETQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQKPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAYGLNECGATHLITSTELLETKLKSILPEMHNLKHIIYVDNKSIRRTGYPE
GIQIHSMQAVQELGAKPDNLSIAVQRPQPTDLAVVMYTSGSTGQPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLGPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NLLLFKKVKAQLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIENI
CAYANSDQNYVISFVVPNQKQLTILANKNGISVAWEEICNHPAMEKEVLKAIKEVATSIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcaaagtagacatgcattacatagtgttctcgcctgtgtacctgttgatgtgg
ctgtacacgctcatcacgtttatcccatggtatttcctcactgatgctgggaagaagaaa
accatggcaaagagagagaaagccaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacacagactgcctgggcaccagggag
ctcctaaatgaggagaacgagacgcaacccagcggcaaaatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagatcatcagtcatctaggtagt
ggactggcagccctgggccagaagcccaagagtaccatcgccatcttctgtgagacacga
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaggcagtggcctatggcctgaatgagtgtggggccactcac
ctgatcaccagcacagagctactggagactaaactcaagagtattttgccagaaatgcat
aacctgaagcacattatctatgtggacaacaagagcatcagaaggacgggttacccagag
ggcattcagatccacagcatgcaggcagtacaagagctgggagccaaacctgacaacttg
agtatagctgtgcagcggccccagcccacagacctggctgtggtcatgtacaccagcggc
tccacaggacaacccaaaggagtcatgatcatccacagcaatcttattgctggcatgacg
ggccagtgtgagaggatcccaggcctggggccgaaggatacctacattggctacctgcct
ctagctcatgtgctggagatgactgctgagatctcatgtatgacgtatggctgcaggatt
ggctactcttccccacaaacactctctgaccagtcaacaaaaatcaagaaaggcagtaag
ggagactgctctgtgttggggcctactctgatggcagctgttccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggactctgttt
aaactgggctacaactacaaactggaacagatcaaaatgggctatgatgcccctctctgc
aacttgctgctgtttaagaaggtgaaggctcagctgggagggaacatcaggatgatgctg
tcaggaggggcgcccttgtcctccgccacacagcgattcatgaacatctgcttctgctgc
cctgtgggacagggctacggcctcacagagacctgcggagcaggtaccatcacagaggtg
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtcaaactacga
gactgggttgagggtggatataccagtcaggaccagccccacccgcgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagtgagcacctgaacaatgacttc
tgggtggatgagcagggccagaggtggttctgtaccggggacgtgggggagattcaccct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tacgtgtccttggggaaagtggagtctgctctgaaaaactgcccccttattgaaaacatt
tgtgcatatgcaaacagtgaccagaactatgtgataagctttgtggtaccgaaccagaag
cagctgacaattctggccaataagaacggcatcagtgtcgcctgggaggagatctgtaac
catccggccatggagaaagaggtcttgaaggccatcaaagaggtggctacctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctgagcccagagccctggacccctgag
actggcctggtgacggacgcattcaaactgaaaaggaaggagctgaagaaccacttccag
actgatatcgagagaatgtacggagggaagtag
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