Oncorhynchus tshawytscha (Chinook salmon): 112257767
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Entry
112257767 CDS
T05605
Symbol
tjp1b
Name
(RefSeq) tight junction protein ZO-1 isoform X1
KO
K05701
tight junction protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
otw04530
Tight junction
otw04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112257767 (tjp1b)
04530 Tight junction
112257767 (tjp1b)
04540 Gap junction
112257767 (tjp1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112257767 (tjp1b)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112257767 (tjp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
112257767
NCBI-ProteinID:
XP_042180135
LinkDB
All DBs
Position
LG01:7189821..7367335
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AA seq
1921 aa
AA seq
DB search
MITYVFIWVGFLVAVDNTMVNYQKYITVMQLALGVTSYNKEHHLPPRKSLWIHPSLLHPG
NLPHGRASRGQGQGQGHGHGHGLGHGSGSISASSSVSSIHQAKPSLRRIKGRIHRSKSLD
SIDLLDSKSAAMEETVIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLK
GGPAEGLLQENDRVTMVNAVSMDNVEHAYAVQQLRKSGKNAKITIRRKRKVHVPMSRLGE
RATMSEHDDEEEDEEDSYDEEIYETRSARSGPSAYSAVGGASARRSGRSAGRREKDRERE
RSGSRERSLSPRADRRSLNQPPRPAKVTLVKSRKNEAEYGLRLASHIFVKDISPESLAAR
DGNIQEGDVVLKINGTVTENLSLIDAKKLIERSKGKLKMVVQRDERATLLNIPDLDDSVP
SANASDRDDISDIHSVASDHSNRSHDRHRSSRSRSPDRRSDPSDHSRHSPPQISNGRLFS
WRIPHRSREEEERISKPTAVPPKLAEQAPALPKPPEKSVTREEKPVPPLPEPKPVYAQPG
QPDVDLPVSPADAPVPSAAHDDSILRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLED
SPAAKEGLEEGDQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVES
DVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHQEVERGI
IPNKNRAEQLSSMQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAY
ERVVLREAGFLRPVVVFGPIADVAREKISREEPDLFELAKSEPRDAGTDQRSSGIIRLHT
IKQIIDRDKHAVLDITPNAVDRLNYAQWYPIVVFLNPDSKQGVKNMRTRLCSESRKSARK
LYERALKLRKNNHHLFTTTINMNNMNDGWYGALKETVQQQQNQLVWVSEGKADGAPDDDL
DIHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLNDEVGLPTEPA
ITRSSEPVREDPPVIQDPSSGGYSGYQHASVTPSDPANCIDPSGFKMSAAPQQQDDAALA
IPSSLLPAAVAPPAVETESQQPVLQLEGMTPDLEEETPVAAPQAADTLLSSPSPAPTELA
PPPTPPSLEPQHLSQSPLGPGPEPKMYKKDLYSLEEPVRVNHGGMKSSLSYTQQPYQDKQ
PYRQYDHPPYAFCSDRGGYAEPKPQQGNFDSHLQYDNRVPQNYDDGRWPPYDQQTSSPQP
PGYQPGPVHQQGYPPRGTTPYEDGPVRDYSPPQPRYDEAPAGMQGYDGKPRHGKPPGPMR
YDEPSLPPSAGPYDACSPYEAEPPHGYCLSSPRSPEPPKQYYGDSAPGLRPSYNPVPPSR
GGGYNREPLMTSDPPLPPHKPEPLASPGEMGVNAGSKPLPPPPRGEEEKDDPAMKPQSVL
NRVKMFENKRSVSVDRAKEAGDSTVMRPADLPRPMTAPGPVPKANSLSNLEQEKPTYRAP
EPQNAPGSKPLDDVAHSSNHYDADEDEEYYRKQLSYFDRRSFDSKTMNPTPGINRFPPQT
QLAYPYNRAESMEKVSPVEKRYEPLPQISPVSQYGPPSPAVPPNSLPKLTTNDVNSQPDN
LLSASPKHDLSGLRPSTLQDLPSQPYLAQRSPVGVNGTDAPPKTPGTTPTPQSYNRYVPK
PYTSSARPFERKFESPKFNHNLLPNDLLISSSNPKPSVVNNNSRTKPPLSPQALDHDSGL
DTFTRTMDNRGPKYQQHNNLVNNAVPKAIPVSVLEDDEEDEGHTVVATARGIFNCNGGVL
SSIETGVSIIIPQGAIPDSIEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLQF
LKPVELRLPHCASMTPDGWSFALKSSDSSSGDSKTWQNKSLPGDPNYLVGANCVSVLIDH
F
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgattacctatgtttttatttgggttggattcttagtagcggtggacaataccatggtg
aattaccagaaatatattactgttatgcagctggctctgggggtgacctcctacaacaaa
gaacatcatcttcctcccaggaaatcgttgtggattcaccccagcctcctccaccccggc
aatctcccacacggcagagccagccggggtcaaggccaaggtcagggacacggacacgga
cacgggctaggacacgggagcggctcgatctctgcatcgtcgtctgtgagcagcatacat
caggccaagccgtcgctacgcaggatcaaaggtcgtatccacaggagcaagagcctggac
agcatcgacctgctggactccaaaagtgcagctatggaggagaccgtcatatgggaacag
cacacagtaactctacacagggcaccagggtttggctttgggatagccatctcaggaggt
cgggataaccctcattttcagagtggtgagacctccatcgttatctcagacgtcctgaag
ggaggtccagccgagggcctactgcaggagaatgacagagtcacgatggtcaacgccgtc
tccatggacaacgtggaacatgcatacgcagtccagcaactacggaaaagtggaaagaat
gctaaaattacgatcagacggaagcggaaggtgcatgtacccatgagtcggctgggggag
agggcgaccatgtcggagcatgatgatgaggaggaggatgaggaagatagctacgacgag
gagatatacgagacgcgctccgcacgcagcggccccagcgcctacagtgctgtgggtgga
gcctcggcccggcgcagcgggaggagcgccggaaggcgggaaaaggacagagagcgggaa
cgcagtggctcacgggagaggagtctctccccgcgcgcagaccggcgctcgctcaaccag
cccccgcggcccgccaaagtcaccctcgtaaagtcccgaaagaatgaagcagaatatggc
cttcgcctggccagccacatcttcgtgaaggacatctcacccgagagtctggcggccagg
gacggaaacatacaggagggagacgttgtactgaagatcaacggcacggtgacagaaaac
ctgtcgttgatagacgctaagaagctgattgagaggtcaaagggcaagctaaagatggtg
gtgcagagagacgagagagctacgctgctgaacataccagacctggacgacagcgtccca
tcagccaacgcctccgacagagacgacatttcagatatccattcggtggcgtccgaccac
tccaaccgatcccacgacagacatcgtagcagccggtcccgctcccctgacaggcgatct
gatccctccgaccactccagacactcccctccacagatcagcaacggcagactcttcagt
tggagaatacctcacagaagtcgtgaggaggaggagaggatctcgaagccgacagcggtg
ccacccaagctagcggagcaggctcctgccctgcccaaacccccggagaagtctgtcacc
agggaagagaaaccggtccctcctctaccagaacccaagccagtatatgcccagccaggc
cagcctgacgtggacctgccagtcagccccgctgatgcccctgtgcccagcgctgcccat
gatgacagcatcctacggccaagtatgaagctggtgaagtttaagaagggggagagtgtg
ggtctgaggctggcaggggggaacgatgtgggcatctttgtagcaggagtcctggaggat
agcccagcagctaaggagggtctggaagagggggatcaaattctcagggttaataatgtg
gattttgctaatatcatccgagaagaggcggtgctgttcctccttgacctccctaaaggt
gaagaggtcaccatcctggcccagaagaagaaggatgtgtaccggcgaatcgtggagtct
gatgtgggcgactcgttctacatccggacccactttgagtatgagaaggagtctccgtac
ggcctgagcttcaacaagggagaggtgttcagagtggtggacaccctgtacaacggcaag
ctgggctcttggctggccatccgcatagggaagaaccatcaggaggtggagagaggcatc
atacctaacaagaacagagcggagcagctgtccagcatgcagtacaccctccctaagaca
gcagggggcgacagggcagacttctggaggttcaggggcctgaggagctccaagaggaac
ctgaggaaaagcagagaggacctgtcggcccagcccgtacagaccaagttccccgcttac
gagagggtggtgctgagagaggctggattcctcagacctgtggtggtatttggacccatc
gcagacgtggcacgagagaaaatctcccgggaggagcctgatctgtttgaacttgcaaag
agtgaacctagagacgcagggacagaccagcggagttcaggaatcatccgtctccacacc
atcaagcagatcatcgacagagataaacatgcagtcctggacatcacccccaacgcggtg
gaccgtctgaactacgcccagtggtaccccatcgtggtgttcctcaacccggacagcaag
cagggcgtcaagaacatgagaaccaggctctgttccgagtccaggaagtcagcccggaaa
ctctacgagagagccttgaaactaaggaagaacaaccaccacctcttcaccaccaccatc
aacatgaacaacatgaacgatggctggtacggcgctctgaaggagaccgttcagcagcaa
cagaaccagttggtctgggtgtcagagggcaaggcggacggcgctccggacgatgacctc
gacatccatgatgaccgtctgtcatatctgtcagccccgggcagtgagtactccatgtac
agcacggacagccgccacacctctgactatgaggacacggacacagagggcggggcctac
actgaccaggaactagacgagacgctcaatgacgaggttggcctgcccacggagccagcc
atcacccgctcctcagagccggtcagagaggacccgcccgtcatccaggacccctcgtct
ggtggttactctggataccagcacgcttctgtgacgccgtccgacccggccaactgcatc
gacccgtccggtttcaagatgtccgccgctcctcagcagcaagacgatgctgctctggct
attccttcctctctgctgcctgcggcggtggcgccccctgctgttgagactgagtcacag
cagcctgtgttgcagctagagggtatgacccctgacctggaggaggagactccggttgca
gctcctcaggctgcagacacactccttagcagccccagtcccgcccctactgagctagcc
ccgcccccaacaccaccatcactcgaaccccaacacctgtctcaatcgccgctcggccct
ggtcctgaacccaagatgtacaagaaggatctgtacagtctggaggaaccagtgagagtg
aaccacggaggcatgaagtcgtctctgagctacacccagcagccctaccaggacaaacag
ccataccgccagtacgaccacccgccttacgccttctgtagcgacagggggggctacgcc
gaaccaaagcctcaacaggggaactttgactctcacctgcagtacgacaaccgtgtgcct
caaaactacgatgatggccggtggcccccctacgaccagcagacctcttctccccagccc
ccggggtaccagcccggcccggtccaccagcagggctaccctcccaggggtaccaccccc
tatgaggacggtcccgtcagggactacagccccccccagccccgctacgatgaggccccg
gcgggtatgcagggctacgacggcaagcctcgtcacggtaaacctccggggccaatgcgg
tatgatgaaccgtctctcccgccctcggctggcccttacgacgcctgctctccctacgag
gccgagccccctcacggctactgcctcagctctccccgctccccggaaccccccaagcag
tattacggagactctgctcctggcctgagaccctcctataacccggtgcctcccagtcgg
ggcggtggctacaaccgtgaacctctaatgacctctgacccaccccttccccctcacaaa
cctgagcccttggcctctccgggagagatgggggtaaacgctgggtccaaacccctccct
ccaccgccccggggggaggaggaaaaggacgacccagccatgaagccccagtcggtgctc
aacagggtcaagatgtttgagaataagaggtcagtgtctgtggaccgggccaaggaggct
ggcgactccaccgtcatgaggcctgcggacctgcccagacctatgactgcacctggtcct
gtccccaaagccaactccctcagcaacctggagcaggagaagcctacttacagagccccc
gagccccagaatgcccctgggtctaagcccctggatgacgtggcccactcctccaaccat
tacgatgctgacgaggatgaggagtactacaggaagcagctgtcctactttgaccgccgc
agcttcgacagcaagaccatgaaccccacccccgggatcaaccggttcccaccacaaacc
cagctagcttacccttacaacagggcggagtctatggagaaggtgagtccggtagagaag
aggtacgagcccctcccccagatcagtcctgtctcccagtacggaccccccagccctgcc
gtaccacccaacagcctgcccaaactcaccaccaatgatgtgaactcacagcccgacaat
ctcctcagcgcctctcccaaacacgatctctccggccttcgcccctctaccctccaggat
ctcccctcccagccctacctggcccagaggtccccagtgggggtcaacggcaccgacgca
ccccccaaaacccctggaaccacccccaccccacaaagctacaaccgatatgtccctaag
ccttacacctcctcggcccggcccttcgagaggaagtttgagagccccaagttcaaccac
aacctcctccccaacgacctcctgatcagtagcagcaaccccaaacccagtgtggtcaac
aacaacagcaggaccaagccgccgctgtctcctcaggccctggaccacgacagtggactg
gacacgttcacacgcaccatggacaacagggggcccaagtaccagcagcacaacaactta
gtcaacaatgctgttcccaaggccatacctgtcagtgttctggaagatgatgaggaggat
gaaggtcacacagtggtggccacggcccgggggatcttcaactgtaacggcggggtgctg
agctccatcgagacgggagtcagcatcatcatcccccagggagccatccccgacagcata
gaacaggagatctatttcaaggtctgtcgggacaacagcatcctgccccccctggacaag
gagaaaggagagaccctgctcagccctctggtgatgtgtgggcctcatggtcttcagttc
ctgaagccggtggaactgcgtctacctcactgtgcgtctatgaccccagatggttggtct
tttgctctaaaatcctccgactcctcgtcgggtgactccaagacatggcagaacaagtct
ctcccaggagaccccaactacctggtgggagccaactgtgtgtctgtgctcattgaccat
ttctga
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