Oncorhynchus tshawytscha (Chinook salmon): 112257771
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Entry
112257771 CDS
T05605
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit gamma
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112257771 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112257771 (chrne)
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112257771 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112257771
NCBI-ProteinID:
XP_024287366
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Position
LG09:30280297..30289589
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AA seq
523 aa
AA seq
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MNFAMARYSFWTCLIATAGLLWGVTIPVSCNEESKLIGDLFRGYNKNIRPAAHPTDKVEV
QVKLILTNLISLNEKEETLTTNVWIEIQWNDIRLAWNTSEYFGIEVIRVPYNTVWLPDIV
LENNIDGKFDVAYYANVLIYSSGYMYWLPPAIYRSTCAIEITYFPFDYQNCTLVFRSQTY
SANELEIMLAVDTETEQPIEWVDIDPEAFTENGEWAIKHRPARKLINSRYTPDDLEYQEI
SFNLVIQRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLI
AQKVPETSLNVPLIGKYLIFVMSVTTLIATNQIVVLNISLRSPNTHTMSHTIKHLFLELV
PRFLGMDPLVDDGEAEAEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLT
RSVVDGIDVSTTASLYKSLAQAAPEIKECVDACNFITESTKQANDIGSEMESWVLIGKMI
DKVCFWVAMALFSIGTVAIFLTGHFNSVPDFPFPGENKRYLPS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcgatggcaaggtactccttttggacgtgtttgattgcaactgcaggccta
ctctggggtgtgacaataccagtgagttgtaatgaggagtctaagctgattggggacctg
ttcagaggctacaacaagaacatccgtccagcggcgcaccccactgacaaggtggaggtg
caggtcaagctgatcctcaccaacctcatctccctgaacgaaaaggaagagactctcacg
actaatgtctggattgagatccaatggaatgatattcgcctggcctggaacacctctgag
tattttggcatcgaggttatccgtgtgccttacaacacagtgtggcttcctgacattgtc
cttgagaacaacattgatggcaagtttgacgtggcctactatgccaatgtgttaatctac
tccagtggctacatgtactggctgcctccagctatctaccgcagcacatgtgccatagaa
atcacctacttcccctttgactaccagaactgcactttagtctttaggtcccagacatac
agtgcaaatgagttggaaatcatgctggctgttgacacggagactgaacagcccattgag
tgggtggacattgatcctgaggccttcactgagaatggtgagtgggccataaagcaccgg
ccagccaggaagctgatcaactcacgctacactcctgatgacctggagtaccaggagatc
tccttcaacctggtcatccagaggaaacctctgttctacatcatcaacatcattctgccc
tgctcacttatctcctccttggtcgtcctggcctacttcctacctgcacaggctggggga
cagaagttgactgtgtccatctctgtcctgctggctcagactgtcttcctctttcttatt
gctcagaaggtccctgagacatctctcaatgtccctctcattggcaagtacttgatcttt
gtcatgtctgtgacaacgctcatcgccaccaaccaaatcgtggtgctcaacatctccctc
cgcagtcccaacacccacaccatgtctcacactatcaaacacctcttcctggagcttgtc
cctcgatttctgggtatggaccctctggtggatgatggcgaggcggaggcggaggtgaat
ggagtgagggagcgacggcgtagctcgttcggcctgatgcagagagcggaggagtatgtg
ctaaaacagccacgcagcgagatgatgtttgacaaacagagagagaggcatggcctcaca
cgatctgttgtggatgggattgatgtgagcaccacagccagcctgtacaagagcctcgcc
caagctgctcctgaaatcaaggaatgtgtggatgcttgtaactttatcactgagagcaca
aagcaagcaaatgacattggatcagaaatggagagctgggtattgattgggaagatgatt
gacaaggtttgtttctgggtggccatggctctcttctccatcggaacggtcgccatcttc
ctcacgggacatttcaactctgtcccagattttccattccctggggaaaacaaacgatac
ctccccagttag
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