Oncorhynchus tshawytscha (Chinook salmon): 112257810
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Entry
112257810 CDS
T05605
Name
(RefSeq) tsukushi
KO
K08130
tsukushi
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112257810
Proteoglycans [BR:
otw00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
112257810
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
LRR_NXF1-5
LRR_EndoS
LRR_14
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
112257810
NCBI-ProteinID:
XP_024287438
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Position
LG09:complement(31755409..31763452)
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AA seq
355 aa
AA seq
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MSSFLGVSVWFLLVLHYVAAVMDCHPGCRCEVESFGLFHSFSLTRVDCSGVGRGHGLVVP
ISIPLDTSSLDLSSSAIHTIADSMLSGPGYTTLASLDLSNNLLSRLNSSIFSRLRYLETL
DLSHNTLEELAPGCFSGLPLAEVDLSGNRLQEVNLEVFSNKGHGAGPLNVDLSNNLLNTV
TTRDPQVLSPPNIQSLSLAGNRLRAVPKLQGLPLRSLSLDGNPILSIERHSFTGLRDLAY
LSLSGLSELTSIQLQSFSELSSLQVLDLSHNSRLRPLNPEVFSGLAALQELNLSNSGVVS
LPSNILNLLPSIKSIVLREKVNCWKTHRQVQFHRQIGGQSTRGEELTCDVIGIVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttcctgggtgtgagtgtttggttcttgcttgtccttcactatgtggctgca
gtgatggactgccacccgggttgtcgctgtgaagtcgagagcttcggcctgttccacagc
ttcagcctgacccgggtcgactgtagtggggtgggccgtggtcatggcctggtggtcccc
atctccatccccctggacacctcctccctagacctgtcctccagcgccatccacaccatc
gctgactccatgctgtctgggccaggctacaccacgctggccagcctggacctcagcaac
aacctcctctccaggctcaacagcagcatcttctccaggctgcgctacctggagaccttg
gacctgagccacaacaccctggaggagctggcccccggctgcttctctggcttgcccctg
gccgaggtggacctgagcggcaacaggctccaggaggtcaacctggaggtcttttccaac
aagggccacggtgcaggacctctcaatgtggacctgtctaacaacctgctgaacactgtc
acgactagggatccacaggtgctaagccctcctaacattcagagcctcagtctggcaggg
aatcgtctgagggccgtgcccaagctgcagggcctccctctgaggtctctgagcctggac
ggcaaccccatcctcagcatcgaaaggcacagcttcacagggctaagggatctggcatac
ctgtctctcagtggactgtctgagctcacctccatccagctccaaagtttcagtgagctg
agcagcctgcaggtcctggacctgtcccacaacagcaggctgagaccacttaaccctgag
gtgtttagcggactggctgccttacaggagctcaacctgtctaactcaggggtggtgtct
ctgcccagcaacattctcaacctcctgcccagcatcaaaagcatcgttctcagggagaag
gtaaactgttggaagacccatagacaggtgcagttccacagacagataggaggacagtca
acaaggggagaggaattgacctgtgatgtcataggaattgttttatga
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