Oncorhynchus tshawytscha (Chinook salmon): 112257815
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Entry
112257815 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112257815
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112257815
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112257815
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112257815
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112257815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
UIM_2
Motif
Other DBs
NCBI-GeneID:
112257815
NCBI-ProteinID:
XP_024287449
LinkDB
All DBs
Position
LG09:32041314..32091941
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AA seq
1199 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLAEAVAFLTEKNAKV
PQQDEATYYQTTQVGNDRYISVGSQADTSEYLPHPALPGAVPSQGDTNVIDLTGDDKDDL
QRAIALSLEESSRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRK
RMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLYYSPPARVQDLPRNQKEHRNLPFM
QELRNLFSLMVGSKRKYVDPSRAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKA
EEDREGEKPKNPMVELFYGRFQAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMI
EGEIESLHSSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLY
MDRYMDRNREITRIKREEIRRLKEQLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFAS
SKPVCTSPLEDIDTSAPPGGTTGQLMPALSTAEQGTSCTLPEGLSPAPTQAPSTQQRVPI
HKPFTQSRLPPDLPMHPAPRHITEEELRVLEGCLHRWRSEVENDTHDLQGSISRIHRTIE
LMYSDKSMMQVPFRLHAVLVHEGQANAGHYWAYIYDPHQQRWMKYNDISVTKSSWEELVR
DSFGGYRNASAYCLMYINDKKPFLIEEEFDKETGQMLSGLDKLPSDLKAYVKEDNGLFDK
EIEEWDTLQARKAQQEKLALAAATAAAETTSPQPMSTEPSPPDSWGPQQDPEYMEQPSPT
DDSKHLQEDTERAISKAAAEKQEERSPEGLLTASSGGSLSPPLPPKPQSDVQVNTETPLA
PPSDPQPVDPSLTPPSDPPMEDEPLSQRTVEVAIPQVGTFVIESEEGGYDDEAMMTPNMQ
GIIMSIGKARSVFEKLGPEAAFFKAIKVEYTRLLRFAQEDTAPENDYRLQHVIVYFIHNQ
APKKILERTLLMQFADRNLSFDERCKSIMKVARAKLDLVKPEEVNMEEYEMWHQDYRNFR
ETTIFLMIGLELFQKKCFVEALMYLIYSYQYNRELLVKGLYRGHNDALIGHYRRECLLKL
NENAAGMFESGEEPEVCNGLSIMNELVVPCIPLLLVHDTEKDLLAVEDMRNRWCSYLGQE
MEPNLQEKLTDFLPKLLDCSTEIKSFHDPPKLPTYSTLELVERYGRVMASLSRVPADGR
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccaacagcattctcagaagcaccagcagactctactg
aaccagctgagggaggtcacaggcaccacagacgtccagctgctccagcaggccctgcag
gtcagtaatggagacctggcggaggcggtggcctttctgacagagaagaatgccaaggtg
ccccagcaggatgaggctacctactaccagaccacccaggtgggcaacgacagatacatc
agcgtgggcagccaggcagacactagtgagtacttacctcacccagcactgcccggggca
gtccctagccagggagataccaacgtgattgacctgactggtgatgataaggatgacctc
cagagggctatcgctctcagcctggaggagtccagccgggccttcagggagactggcatc
accgacgaggagcaagccatcagcagagttctggaggccagcatagcggagaacaaggcg
agcctgaagcggacacacacggaggtgtggagtgactcgcccaaccctcacgacaggaaa
aggatggagaactgccccgtcgggctcaagaacgtgggcaacacctgctggttcagcgcc
gtcatccagtctctgttcaacctactggagttccagaggctggtgctgtattactctcct
cctgccagagtccaggacctgcctcgcaaccagaaggagcacaggaacctgcccttcatg
caggagctgagaaaccttttctcactcatggtgggttctaagaggaagtacgtggaccca
tcgcgtgctgtggagatcctcaaggacgccttcaagtccagcgagtctcagcagcaggat
gtcagtgagtttacacataagctgttggactggttggaggatgccttccagatgaaggca
gaggaggacagagagggtgagaaaccaaagaacccgatggttgagctgttctatggccgc
ttccaggctgtgggggttctggaaggaaagaagtttgagaacacagagatgttcgggcag
taccctctgcaggtgaatggctttaaggacctgcacgagtgtttagaggcagccatgatc
gagggggagatcgagtccctacactcatctgcagagaactctgccaagtctggacaggag
cactggtttaccgaacttcctcctgtcttgacctttgaactgtcgagatttgagttcaac
caagccctgggtcgacctgagaagatccacaacaagctggagttcccctccatgctgtac
atggacaggtatatggacaggaaccgagagatcaccaggattaaacgagaggagatcagg
agactgaaagagcaactgactttacttcaacagcgtctggagaggtatctgagctatggc
tctggtcccaagaggtttcctctggcagatgtcctgcagtacgccatggagtttgcctcc
agtaagccagtctgcacctctcccttggaggacatcgacacgtcagcaccacccggtggc
acaacggggcagctgatgcctgctctaagcacagccgaacagggtacctcctgcaccctt
ccagagggtttgtcccccgcccccacccaagctccctccacccagcagagggtgcccatc
cacaagcccttcacccagtcccgactgccccctgacctgcccatgcacccagccccacgc
cacatcactgaggaggagctccgggtgctggagggctgcctgcaccgctggaggagtgag
gtggagaacgacacccatgatcttcagggcagcatatccagaatccacagaaccatcgag
ctgatgtattctgacaagtccatgatgcaggttccgttccggctgcatgcggtgctggtg
cacgagggccaggctaacgctggccattactgggcctacatctatgacccccaccagcag
cgctggatgaagtacaacgacatctcggtcaccaaatcctcctgggaggagctggtcagg
gactcgttcggaggctaccgtaacgccagcgcctactgcctcatgtacatcaacgacaag
aagcctttcctcatagaagaggagtttgataaggagacgggtcagatgctgagtggtctt
gataagctcccttcggacctgaaggcctacgtgaaggaggacaatggcctgtttgacaag
gagatcgaggagtgggacaccctgcaggcacgcaaggcccagcaggagaagctggccctg
gccgcagccactgcagcagcagaaacaacatcccctcaacctatgagcacagagcccagt
ccaccagacagctggggccctcagcaggacccagagtacatggagcagccgtcccccaca
gatgactccaagcacctgcaggaggacacagagagggccatctccaaggctgcagctgag
aagcaggaggagaggagccctgagggactgcttactgcatccagtggagggagtctctcc
ccaccccttcctcccaaaccccagtccgatgtccaggtgaacactgaaacccccctcgcc
cctccctctgaccctcagcctgtggatccttccctcacccctccctctgacccccccatg
gaggatgagcccctttcccagcgtacggtagaggttgccattccccaggtgggaaccttt
gtcatcgagtcagaggagggggggtacgatgatgaggccatgatgactccaaacatgcag
ggtattataatgtccattggcaaggccaggagtgtgtttgaaaagcttgggcctgaagcc
gccttcttcaaggccattaaggtggagtacacccgtctgctgaggtttgcccaggaggac
acggccccggagaatgactaccgtctgcagcacgtcatcgtctacttcatccataaccag
gcccccaagaagatcctggagagaaccctcctcatgcagttcgcagaccgcaacctaagc
tttgacgaacggtgtaagagcattatgaaggtggcccgtgccaaactagaccttgttaag
ccagaagaggtcaacatggaggagtatgagatgtggcatcaggactacaggaatttccgc
gagacaacaatctttctgatgattggcttagagctgttccagaagaaatgctttgtggag
gccttgatgtacctgatctactcgtaccagtacaacagagagctgttggtcaaagggctg
tacagaggtcacaacgatgcgctcataggtcactaccgcagagagtgcctgctgaaactg
aatgagaatgcggcggggatgtttgagtctggtgaggagccggaggtttgcaatgggctg
agcatcatgaatgagctggtggtgccgtgtatccccctactgcttgtccacgacacagag
aaggacctgctggctgtggaggacatgaggaaccgctggtgctcctacctggggcaggag
atggagcccaacctgcaggagaagctgactgacttcctacccaagttacttgactgctca
acagagataaaaagcttccacgaccctccaaagctgcccacctactccactctggagctg
gttgagcgctacggccgtgtcatggcctccttgagccgggtgcctgcggacgggagatga
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