Oncorhynchus tshawytscha (Chinook salmon): 112257818
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Entry
112257818 CDS
T05605
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04517
IgSF CAM signaling
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112257818
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112257818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112257818
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112257818
Intermediate filaments
Intermediate filament-binding proteins
112257818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
112257818
NCBI-ProteinID:
XP_042182753
UniProt:
A0A8C8IPU6
LinkDB
All DBs
Position
LG09:32417786..32443453
Genome browser
AA seq
1607 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMTELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLHKFQSQMGDLYKDVGELGSLQGVCLPQRGSLEKGREGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRRARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQLWEVLRLEAERRTVMLDVV
LQAQQYYSEAAKVESWLAGQKLHLISEEKGMDEASTLQLLKEHLALEAMVENYAETVGML
SQQCQRQLELAHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEDVTMLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRGQMLTASYQLHKFFTDCKEVLVQIAGKMRQLPEV
RACQASIANPATLQRLMRSFEHALQLLVSQVRQLQENAAQLRAIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREHLMWMEGIMGQIGGDDPRDSSSAEVMM
KQHGELKAKMDGRSKTLQQCVELGKILLAAGNPAAEEIKDKLDTLLAKQKDLSERWDKHQ
EKLQRKKDQFQYAQETVTAEAWLKAKEPLINSSSNSREAGGAGGEAQAQTDEVEQLILRH
EAFRKAAATWKERFSSLRQLSNAEKLREEQSSNPAPTPLSSRRMFPSSCLTPTFPLATST
LLRQTVQLHIEPRPKQTSLGMAASASTAAQRLGSTMASYTPVMNGSSYHGLDHQSSSGGL
ESSNYPGLNHQACGGVDSSSSYLGVNHQTAPLPVDSSGYLGLNHQSSGGMVSPGYLPQNQ
SSGGMGSPGYLPQNQSSGGMGSLGYLPQNQSSGGTGSQGYLPQNQSSGGLGSSGYLPQNQ
SIGGIVSPGYLAQNQHSGGMGSSGYLAQNLSSGSMGSSGYLAQNHQSSGGMGSSGYLAQN
QGSGVMGSSGFLAQNQCSGIMGSSGYLAQNQNSGGMGSSGYLAQNLSSGGMGSSGYIAQN
QGSGCMGSSGYLAQIQGSGGMGSSSYLPQSGGVMDPKMAYAWQHLKADCMQPRINHIHKA
VNPLLEASRAQREQFGDIPMVDMIGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYK
LGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKARTPRQDDSSDMESAK
EGSDKRSTEKRATTMAEIVEQAQEREAAQARGETYRPTSSLSAPVTYERPRARDRPKPRR
RPRPKELEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFEGQQKSPSSKSWVNLYC
VLSKGEIIFYKDAKSITTPYNEETPLDLSVCICDSTMGYKKKKNVFVIKKNDGNDYIFHA
KDEEDLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSEGDADARSERSEMGG
EVEEEERSEKGEGSEKTGEGSEKADTSERGEMAEGGAGGSSTSGKSK
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcaccggaaa
tggctgaagcaccaggccttcatgaccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggtcaggaactgatcgatgagaagccggagctgcgttcggtggttcag
cagaagctggaggagatcagggagtgttggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagccccctcagctggagcaggctcaccatctg
cccaccttcaatgagcagctgcataaattccagtctcagatgggggacttgtacaaggac
gtaggggaactagggtccctccagggggtgtgcctcccccagcgaggcagcctggagaaa
ggcagggaaggagaagggggcgagcagccagctgtggtggagacccgcatcgtgcgcctc
atcgagcccctgaaagagagacgtcgcattctgctggcctccaaggagatgcatcaggtc
gcccaggacctggaggaagagatactgtggatccaggagcggcttcctctggcttcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacgctg
cagagggatctgcagggtcgccgggcgcgggttgaggaggtgttggaccgggcggggatc
attgcctctctgcggacccccgaggtggactttgtgcgcgagggggcagggcacgtgcgt
cagctttgggaggtgctgaggctagaggcggagaggaggactgtgatgctggatgtggtg
ctgcaggcccagcagtattacagcgaggcggccaaagtcgagtcctggctggcaggccag
aaactgcacctcatcagcgaggagaagggtatggacgaagcaagcaccctgcagctgctg
aaggagcacctggccttggaggcgatggtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagaggcagctggaactggcacacccagacagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtacgtgtctctgaaggacatggtggagcacaggaag
accaaactggagcagcagtattggatgtaccagctcaacagagaggtggaggagttagag
aagtggatcactgagcgggaggctgttgccagctccactgagctgggccaagacctggaa
gatgtcacgatgctacaagaaaaattcaccaagttctgctcagagaccaacagcataggc
caacagaggatggagcaggtgaataagatggtgaacgagatgatagactgcggccacacg
gacgcggccacaatcgctgagtggaaggatggactgaacgagtcatgggccgacctactg
gagctcatggaaacccgaggacagatgctaacagcatcataccagctgcacaagttcttc
accgactgcaaagaggtcttggttcagattgcggggaagatgaggcaactaccagaggtg
agggcgtgccaagccagcatcgccaacccggccacgctgcagaggctcatgcgctctttt
gagcacgccctccagctgcttgtctcacaggtaaggcagctgcaggagaacgcggcccag
ctgagggccatctacgccggggaaaaggcagaggccatcatgagcaaggaacaggaagtg
atgtcagcatggaaggagttgctggtttcctgtgaggccagtcgcgtgcaggtcacctcg
gtgacagacaaggtccagttcttctcagtggtgcgtgagcatctcatgtggatggaaggc
atcatgggacagattggaggggacgaccccagggattcgtcctctgcggaggtgatgatg
aaacaacatggtgagctgaaagccaagatggacggccgcagtaagaccctacaacagtgt
gttgagctgggaaagatcctgttggccgcaggcaacccagcagctgaggagataaaggat
aagttggacacactcctggctaagcagaaggatctctctgagagatgggacaaacaccag
gaaaagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgacggcggag
gcctggctgaaggccaaggagccgctaatcaactctagctccaactccagggaggctggg
ggtgctggaggagaggcccaggctcagactgacgaggtggagcagctcatcctccgccac
gaggccttccgtaaggctgcagctacctggaaggagcgcttcagctcactgagacagctc
tccaacgcagagaagctgagagaagaacagagcagcaatcctgccccaacgccactctcc
agtcggaggatgttcccatcatcctgcctcactccgacctttccccttgctacctcaact
ctgctgaggcagacggtccagctgcatattgagcccaggcccaagcagactagtctgggg
atggctgcctctgcctccactgcagcccagaggttgggttctaccatggccagctacact
cctgtcatgaatggctccagttaccatggactggaccatcagagtagcagcggggggttg
gagagttctaactaccctgggctaaaccatcaggcctgtggaggtgtggacagcagctcc
agttaccttggagtgaaccatcagactgcccccctgccagtggatagttctggctacctt
ggactgaaccatcaaagcagtgggggtatggttagtccaggctacctacctcaaaatcaa
agtagtgggggtatgggtagtccaggttacctgccgcaaaatcaaagcagtgggggtatg
ggtagtctaggctacctgccgcaaaatcaaagtagtgggggtacgggtagtcaaggctac
ctaccgcaaaatcaaagtagtgggggtttgggtagttcaggctacctgccgcaaaatcaa
agtattgggggtatagttagtccaggctaccttgcgcaaaatcaacacagtggtggtatg
ggtagctcaggctaccttgcacaaaatctaagtagtgggagtatgggtagttcaggctac
ctggctcaaaaccatcaaagcagtggtggtatgggtagttcaggctacctggctcaaaac
caaggtagtggggttatgggtagttcaggcttccttgcgcaaaaccaatgtagtggaatt
atgggtagttcagggtaccttgcgcaaaatcaaaatagtggtggtatgggtagctcaggc
taccttgcacaaaatctaagtagtgggggtatgggtagttcaggctacattgcacaaaac
caaggtagtgggtgtatgggtagttcagggtaccttgcgcaaatccaaggtagtggaggt
atgggtagttctagctatctgcctcaaagtggtggggtcatggaccccaaaatggcatat
gcgtggcagcatctgaaagccgactgcatgcagcccaggatcaaccatatccacaaggct
gtcaaccccctcctggaggccagcagggcgcagagggaacagtttggggacatccccatg
gtagacatgatcggaccagagtccggcctggagctcctccatggcaggcttcaaagggac
ccccgcggcagccgctccgaccctcagatggaccacctgcggcgggagagggagtacaag
ctgggccgccagacctccagcgaacaggagatccaggcgcggctcaacgagctgccaatg
atcgtgcgtcaggagcgctataggcgacgcctggagaggcagtcgtccagcgagcaggag
ggcagtgggaaggcgaggacaccaaggcaggacgactccagcgacatggagtcagccaag
gaaggctctgacaaacgctcaacagagaagagagccaccacaatggctgagattgtggag
caggcccaggagagagaggcagcacaagccagaggggagacgtaccgccccaccagcagc
ctctcagcacctgtgacctacgagcgcccgcgcgcccgagaccgccccaaaccccgcagg
agaccccgccccaaagagcttgaggagaagcggcgctctcgctcggctccagcccagagt
ccggcgcaactcttgccgccctcacacactgcccataacgaaggcttcctgtaccgcaaa
cacgactttgagggccagcaaaagagtcccagcagtaagtcgtgggtgaacttgtattgc
gtgttgtcaaaaggagagatcattttctacaaggacgccaagagcatcaccacaccttac
aatgaagaaaccccactcgacctgagcgtctgtatatgtgatagcaccatgggatacaag
aagaagaaaaatgtcttcgttatcaagaaaaatgatggcaatgactatattttccatgca
aaggatgaggaggacctgaaggcttgggtcactaacatcaccaccagtataactgaacac
gaggagatcgccaagtgggacaaacccacgacctcgtccacagatcccgaccgctcagag
aggaaagagaagtcagagggtgacgcagatgccaggtcagagagatctgagatgggagga
gaggtggaggaggaagagaggtctgagaagggagaggggtccgagaagacaggcgaaggc
tccgagaaggcagacacgtcggagaggggtgagatggcagagggaggggcagggggctcc
agcacgtcagggaagagcaaatga
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