Oncorhynchus tshawytscha (Chinook salmon): 112257856
Help
Entry
112257856 CDS
T05605
Symbol
specc1
Name
(RefSeq) cytospin-B isoform X1
KO
K23028
cytospin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112257856 (specc1)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112257856 (specc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
Spectrin
CAMSAP_CH
DUF6212
Motif
Other DBs
NCBI-GeneID:
112257856
NCBI-ProteinID:
XP_024287512
LinkDB
All DBs
Position
LG09:35017910..35187023
Genome browser
AA seq
1068 aa
AA seq
DB search
MLKGGMAKAVLPKPGLQERAKQASLAPSTTTSTTTTGIKTSRSSNTLATDLRLSRLKRAS
SDDTLAKPALGAAATGSRMKKTVTAGAISDLAEARPRSLSGVQSGSKKSGIPAPREIPPT
MTRDRVSLRDQLRTSTTKKMVPSASTSSLATLAAKHQRGSTTTKPRVDAEGSERGFLECQ
VRELLAEAKAKEFEISKLRIELQRCRGKASLSSSPSPHNTPSTPPEGAPDQGQGLSQQAT
DAQALVGELREKNGKFQRELAALREENQALKEKLLSLETSPASPLSNNTTTTTSPSKPSV
NGLPSENNTCPPAKSLTPSPLKTSVSSGSDITKGSPSPDSSEFEKIPSQSDSVSSSGVGV
GKGPGRDPSVESLTEQIQKMEESQHSTAEELQATLQELADQQQVVQELTAENERLAERKG
LLQTSLQQQRERVELLAQKNEALAGQLQEVARVQSGDESRAAELEQRYTDLVESSHSERE
KLVDIQQQLMGSLRTLEEEHQETQGQVRSLRQERDDLQGRLEKEVEAGGEMTREAEEHRA
ATDALRVENGRLKAQVDLERQKVGELKAMQSAGDSTELQRLLKAAHSERDRLEGEVTELR
QELLQAQTDTEHAQGLLSKAEAECKQVAERAVRLEEALSGQVSALEKGGQQADSQIKDLK
ETIFELEDQVEQQRAVHLHTNQTILDLEHQLKKLEEQKSEVERQLKILSKQMKDETEEWR
RFQADLQTAVVVANDIKVEAQQEIRSLRRRLQEEQGRSAKLSSDLELQKGVKSLHDDSES
FSDADGSPHWCGISMTQTTQTQSTSSPINTNGNAASSPSEPGATVKSLIMSFDTAVQNGP
GPGHTVQMHSSPRSPLSGIPVRTAPAAAVSPIQRQSSIKPLSKTLEKRINHGEFSHSDKY
GGSGDELKPSSLMRKSPSLESVIKSPATFSSRSHSMSYNKNNSKLSVERKDPLAALAREY
GGSKRNALLKWCQKKTEGYPNIDVTNFSSSWSDGLAFCALLHTYLPAHIPYQELISQDKG
RNLSLAFQAAESIGIKPSLDIDELMHTDRPDWQSVMQYVSQIYKYFET
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagggggcatggccaaggcagtgctgcccaagccagggctccaggagagggcc
aagcaagcctcccttgccccctctaccaccacctccaccacaactacaggcatcaaaacc
tccagatcctccaacaccctggcaacagacctgcgccttagcaggctgaagagggccagt
agtgatgacacactggccaagcctgccctgggggcagcagccacaggctcacgcatgaag
aagactgtcactgcaggggccatctctgacctggccgaagcaagacctcgcagcctctca
ggcgtccaatcaggatccaagaagtctggtatccctgcccccagggagattcctcccacc
atgacccgggaccgtgtgtcgctgagggaccagctgcggacctccacgaccaagaagatg
gtccccagcgccagcacctccagcctggccaccctggcagccaagcaccagcgtggctcc
accaccacaaagcccagggtggacgccgagggctcggagagaggcttcctggagtgccag
gtgagggagcttctggccgaggccaaggccaaggagtttgagatcagcaagctgaggata
gagctgcagcgctgccgggggaaagcctcgttgtcttcatccccctcgcctcacaacacc
ccctccaccccacctgagggtgcccccgatcaaggccaaggtctatcccagcaggccact
gatgcccaggccctggtgggggagctgagggagaagaacgggaagttccagagggagctg
gcggctctgagggaggagaaccaggccctgaaggagaagcttctctccctggaaacttcg
cctgcctctcctctgtccaacaacactaccaccaccaccagcccctccaagccctccgtc
aacggcctcccctcagaaaacaacacttgtcccccagccaagtcactcacacccagcccg
ctcaaaacctcagtctcctccggcagtgacatcaccaagggctcgccctctccggactcc
tcagagtttgagaagatcccgtcgcagtctgactcagtgagcagcagtggtgtaggggtg
gggaagggtccgggtcgcgacccctcagtggagagcctgacggagcagatccagaagatg
gaggaaagtcagcacagcacggcagaggagctccaggcaacactacaggagctggccgac
caacagcaggtggttcaggagctgacggctgagaatgagcgcctggccgagaggaagggc
ctcctacagacgtcgctgcagcagcagagggagagggtagagttgctggcccagaagaat
gaggccctggccgggcagctgcaggaggtggcccgggtccagagcggggacgagtcccgg
gcagctgagctggagcagcgctacactgacctggtggagagctctcactcagagagggag
aagctggtggacatccagcagcagctgatggggagcctgaggaccctggaagaggagcac
caggaaacccaggggcaggtgaggtccctcaggcaggagagggatgacctccagggccgg
ctggagaaggaggtggaggccgggggtgagatgacgcgggaggctgaggaacatagggct
gcaacggatgccctgagggtggagaacggacggctcaaagcccaggtggacctagagaga
cagaaggttggggagctgaaggccatgcagagtgctggggacagcacagagctgcagagg
ctgctgaaggcggcccattctgagagagacagactggagggggaggtaacagagctacgg
caggagctgctacaggcccagactgacactgaacacgcacagggactgctgtccaaggct
gaggctgagtgcaagcaggtggcagagcgagccgtaaggcttgaggaagcgctgagtggc
caggtcagtgccctggagaagggggggcagcaggccgacagccaaatcaaggacctgaag
gagaccatctttgagctggaggaccaggtggagcagcagagagccgtccacctccacacc
aaccagaccatcctggacctagagcaccaactcaagaagctggaggagcagaagtcggaa
gtggagaggcagctgaagatcttgagtaaacagatgaaggatgagacggaggagtggcgg
cggttccaggcagacctccagacagccgtggtggtggccaacgacatcaaggtagaggcc
cagcaggagatccgctctctgaggaggaggttacaggaggagcaggggcgcagcgccaag
ctctcatcagacctggagctgcagaagggagtcaagtcgttgcatgatgactctgagagt
ttctcagatgcagatggcagtcctcactggtgtggcatctccatgacccagaccacccag
acccagtccacctcctcgcccattaacaccaacggcaacgctgcctcctccccctcagag
cccggagccaccgtcaaatccctcatcatgtcctttgacacagctgtacaaaatggacct
ggtcctggacacacggtacagatgcactcctcacctagaagccctctgagtgggatccct
gtccgcacagcacccgcagctgctgtctcccccatccagaggcaatcgtctatcaaaccg
ctctcaaagacactggagaaaaggattaaccatggagagttctctcattcagataagtat
gggggctctggggatgagctgaagcccagcagccttatgaggaagagtccttccctggag
tcggtcatcaagtccccagcaaccttcagcagccgcagccactccatgagctacaacaag
aacaacagcaagctcagtgtggaaagaaaggaccccttggctgcactggcgcgggagtat
gggggatctaagaggaacgctctactgaagtggtgccagaagaaaacagaaggctatccg
aacattgatgtgacaaacttcagcagcagctggagtgatggcctggcattctgtgctctc
ctccatacatacctgcccgcacacatcccttaccaggaactcatcagtcaagacaagggc
cggaatctgtccctggcgtttcaggctgcagagagcattggcatcaaaccctccctggac
attgatgagttgatgcacacggacagaccggactggcagagtgtcatgcagtatgtttct
cagatctacaagtactttgagacttga
DBGET
integrated database retrieval system
