Oncorhynchus tshawytscha (Chinook salmon): 112257874
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Entry
112257874 CDS
T05605
Symbol
si:ch211-283g2.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112257874 (si:ch211-283g2.1)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112257874 (si:ch211-283g2.1)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112257874
NCBI-ProteinID:
XP_024287566
UniProt:
A0A8C8IBU7
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Position
LG09:35653715..35687470
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AA seq
621 aa
AA seq
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MSHKRRLCDCLSFISNQASHDVWAQSVKSQRRHRQKDPTLEMELDQGKMDQEPGRPTWNR
QIEFTLAGIGCAVGLGNIWRFPYLCYRSGGGAFLVPYLLMLLVMGIPLLYMELILGQYMR
RGPVHALAKACPLLKGVGLATVAISFIMCTYYNIIITWGLYYLFSSFQSPLPWQSCNNTW
NTPNCTDHINPNTSSHSSTASQQFFNYRMLERTGGVEESGVLRWELFLLLLLAWILLYFC
IFKGVKSTGKVVYFTALFPYVILLALLINNVQLPGAMEGIRFFIVPNWEKLLELEVWVNA
AAQIFNSIGIGFGSLMAMSSYNNFNNNILKDTLAISITNSLTSILAGFVIFSAFGYMSHL
QNIPVSELAVDGPGLVFVVYPQAFATMSVAPLWAILFFFMLLCLGLDSQFAMVEVMATSL
MDGFGGPLMKFLRHKEMLVLAVCSTAFLLGIPHVMQVGIYVFQLMDHYTAIVSLMFLAFF
EVLAICGLYGVRRLSANLKEMTGNRPNIFFRVCWMFVAPLLITIILVFTIIQFKPARYED
YVYPPWAQGIGWVIAMASIIWIPLGALHTLWVLPGSFTERLVKSITPYALENERGGDTYP
NIAVISSLGRETEKPHIQTNL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataaaagacgattatgtgactgtctttcatttatttccaaccaagcctcccat
gacgtttgggcccagtcagtcaagtcgcagagaagacacagacagaaagacccaaccttg
gagatggagctggaccaaggcaagatggatcaggagccaggcaggcccacatggaacagg
cagatagagttcaccctggctgggatcggctgtgctgtggggctggggaacatatggcgg
ttcccttatctgtgctacaggagtggaggaggtgcattcctggttccctacctgctgatg
ctgctggtgatgggaattcctctgctctacatggagctgattctgggacagtacatgaga
agagggcctgttcatgccctggctaaagcctgcccgctgctcaaaggagtgggcctggcg
actgtggccatctccttcatcatgtgtacttactacaacatcattatcacatggggtctg
tactacctgttcagctccttccagagtccgctgccctggcagagctgcaacaacacatgg
aacacccccaactgcaccgatcacataaacccgaacaccagctcacactcctccaccgcc
agccagcagttcttcaattataggatgctggagaggacagggggagtggaggagagcggg
gtgctgcgatgggaactctttctcctgctccttttggcctggatcctcctctacttctgc
atctttaagggggtcaagtcaacagggaaggtggtatacttcacggctctcttcccatat
gtcatcctgttagctctgttgattaacaatgtccagctcccaggagctatggaaggcatc
cgctttttcatcgtgccaaactgggagaaactcctggagttggaggtttgggtcaacgct
gcagctcagatctttaactccattgggataggctttggctccctcatggccatgtccagc
tataacaacttcaacaacaacatattaaaagacaccctggctatctccatcaccaactcc
ctgaccagtattctggcaggttttgtcatcttctcggcattcggctacatgtcacatctc
cagaacatacctgtcagtgagctggctgtagatggtccaggactggtttttgttgtttac
ccacaagcctttgcaacgatgtcagtggctccgctgtgggcaattctgttcttcttcatg
ctcctgtgccttgggctggacagccagtttgccatggtggaggtgatggcgaccagccta
atggatgggtttggagggcccctgatgaagttcctgagacacaaggagatgctggtgctg
gcagtctgcagcactgcctttctgctgggaataccccatgtcatgcaggtggggatctat
gtattccagctgatggaccactacacggccatagtgtctctcatgttcctggccttcttt
gaggtgctggccatctgcggactttatggtgtgaggaggctttcggcaaacttaaaggag
atgacaggaaataggcctaatatcttcttcagagtgtgctggatgtttgtggctcctctt
ctgatcactattatcctggtgttcacaatcattcagtttaaaccagctcgctatgaggac
tacgtgtatcccccgtgggctcaggggattggctgggtcatcgctatggcatccatcatc
tggatcccactcggagctcttcacacactgtgggttctgccaggctccttcactgagaga
ttagtaaagtcaatcaccccctatgcactggagaacgagaggggaggagacacataccca
aacatagcagtcatcagctccttaggtagagaaacagagaagcctcacattcagacaaac
ctctga
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