Oncorhynchus tshawytscha (Chinook salmon): 112257916
Help
Entry
112257916 CDS
T05605
Name
(RefSeq) collagen alpha-1(XXVI) chain-like
KO
K24358
collagen type XXVI alpha (EMI domain-containing protein 2)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112257916
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
112257916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
EMI
Motif
Other DBs
NCBI-GeneID:
112257916
NCBI-ProteinID:
XP_024287621
LinkDB
All DBs
Position
LG09:37720547..37766653
Genome browser
AA seq
443 aa
AA seq
DB search
MTGSIIFSILCIWMFSPSLSRGTGFIYQFPGVTLQRIHTEHTAGPPAGTNAARRNWCQYT
VSKTVSCQVHNGTEKLVQRMFQSCRWPGPCSNLISYRTIVRPTYMLTYRQVTALEWRCCP
GFMGDNCREECMNCTGYTDMNNRLSILESKIVLLEEAGPPPLPFRYSPDRSSDNEVGAPQ
PTPMPPPTIGLPGARGPPGPVGPQGVVGPPGRTGETGLVGKSGPMGPRGPQGQRGAPGER
GVPGPAGSPGPASPFSHRGDVFGLRELDQYEEAALPSRNNQKDVTGPPGPIGPPGPPGRP
GPTGPAGNTGTPGRNAGFGPSGKPGDRGPKGDTGERGPPALRGEHGQPGAPGPKGEPGDS
QAEGEGVQQLREALKILAERVLILEHMIGIHENPLEPGSGLDILSDLVPMFKNKRAGPNT
LLHSLATGDRKLIGEERVRRGDN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaggttcaatcatttttagcattctctgtatttggatgttttcacccagtctgtca
cgagggaccgggtttatctatcagtttccaggtgtgacattgcaacgcatccacactgaa
cacaccgctggaccccctgcaggcaccaatgcggctcgcaggaactggtgtcagtacaca
gtgtcgaagactgtgtcatgccaggtgcacaacgggacagagaagctggtacagcgtatg
tttcagagttgccggtggccgggaccctgttctaacctcatcagttacaggaccattgtc
cggcccacatacatgctaacgtatcgccaggtgacggcgttggagtggaggtgctgccca
ggttttatgggcgacaactgcagagaggaatgtatgaactgcactggctatactgatatg
aataacagactgagtatccttgagtccaagattgtgttactggaggaggcaggaccacca
cctctcccattcagatactccccagataggtcttcagataacgaggtgggagcaccccag
cccacccccatgcctccccccaccattggcctaccaggagcaagaggccccccaggacca
gttggaccccaaggcgtggtgggaccccctggacgcaccggagagacaggtctcgtaggg
aaatctggacccatgggacccagagggccccagggccagcgaggagccccaggggagaga
ggtgtacctgggccagcgggttctccggggccagcctctcccttctctcacagaggagat
gtgtttggtctgagggagctggaccagtatgaagaggctgcgctcccttcacggaataac
cagaaagatgtgaccggtcccccaggccccatcggaccccctggacccccaggccggcct
ggacccacagggcctgctggaaacacaggtaccccaggcagaaacgctgggtttggtccc
tcaggcaagcctggggatcgcggacctaaaggagacactggtgaaaggggacccccagca
ctcaggggagaacatggtcagccaggtgcaccagggccaaagggtgaaccaggagatagc
caggctgagggggagggggtgcagcagctgagagaggctctgaagatcctggctgagagg
gttctcattctggagcacatgatcggcattcatgagaacccactagaacccggttctggc
ctggacatcctgtcagacctggtgcccatgtttaaaaacaaaagggcgggacccaatacc
ctgctccactctctcgccacgggagaccggaagctgattggagaggaaagagtgaggagg
ggggacaattag
DBGET
integrated database retrieval system
