Oncorhynchus tshawytscha (Chinook salmon): 112257929
Help
Entry
112257929 CDS
T05605
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112257929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257929
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
112257929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
NELF-A_N
Arm_2
API5
FANCI_S3
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
112257929
NCBI-ProteinID:
XP_042182798
LinkDB
All DBs
Position
LG09:complement(38462204..38528971)
Genome browser
AA seq
952 aa
AA seq
DB search
MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSAGPAAPIEQAQSVIPSQGDLLGDLLNLDLGPPVNVPQQSSMQMGAVDLLGGG
LDSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAVLSSGLNDLFELSTGMAITTG
GYVTPKSIWLPAVKAKGLEISGTFSRRQGQMYMDMTFTNKALQHMTDFAIQFNKNSFGVI
PTTPLPIHTPLMPSQSIEVSLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSGLIPLNIF
FVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNDNIYTIAKRNVEGQD
MLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVTQYVYQVYDSVLKN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcaaaatattttacaacaaataaaaaaggggagatatttgagctgaaggca
gagcttaacaatgagaagaaagagaagaggaaggaggcggtgaagaaggtcattgcggct
atgactgtgggcaaggatgtcagctccctcttcccagacgtggtgaactgcatgcagaca
gacaacctggagctgaaaaagctggtctacctgtacctgatgaactatgctaagagccag
cctgacatggccatcatggctgtcaacagctttgtcaaggactgtgaggaccctaacccc
ctgatccgggccctggccgtgcgcaccatgggctgcatccgcgtggacaagatcacagag
tacctgtgtgagccgctgaggaagtgtctaaaggatgaggacccatacgtgaggaagact
gcagcggtgtgtgtggcaaagctccatgacatcaatgcccagatggtggaggaccagggt
ttcctagattccctcagggacctgatcgccgactccaaccccatggtggtggccaacgca
gtggcagctctgtctgagatcagtgagtcccaccccaacagcaacctgctggacctcaac
ccccagaacatcaacaagcttctgacggccctcaatgagtgcactgagtggggccagata
ttcatcttggactgcctgtccaactacaaccccaaagacgagcgcgaggcccagagcatc
tgcgagcgtgtcactccccgtctctcccatgccaactcggcggtggtgctgtcggccgtt
aaggtgctgatgaagttcctggagcttctgcccaaggagtcggactactacaacaccctg
ctgaagaagctgtccccaccgctggtcaccctgctctctggggagccagaggtccagtat
gtggccctcaggaacatcaacctcatcgtccagaaaaggccagagattctgaagcaggag
atcaaggtgttctttgtcaagtacaacgaccccatctacgtcaaattggagaagctggat
atcatgattcgcctggcctcccaggccaacatagcccaggtgttggctgagctgaaggag
tacgccaccgaggtggatgttgactttgtgcgtaaggcagtgagagccatcggacgctgt
gccataaaagtagagcaatctgctgagcgctgtgtgagcaccctgctggacctcatccag
accaaagtcaactatgtggtgcaggaggccatcgtggtcatcagggacatcttccgcaaa
taccccaacaagtatgagagcatcatcgccacgctgtgtgagaacctggactctctggac
gagccggatgctcgcgccgccatgatctggatcgtgggcgagtacgctgagaggatcgac
aacgctgacgagttgctggagagcttcctggagggcttccacgacgagagcacccaggtc
cagctcactcttctgacggccatcgtcaaactattcctcaagaaaccctctgagactcag
gagctggtgcagcaggtccttagtctggccacacaggactccgacaaccctgacctacgt
gacaggggttacatctactggcgcctgctgtccaccgacccggtgactgccaaggaggtg
gtcttgtccgagaagcccctgatctcggaggagacggacctgattgagcccaccctgctg
gatgaactcatctgccacattggctccctggcctccgtctaccacaagcccccaaacgcc
tttgtggagggtagccatggcatccaccgcaagcacctgcccatccagcacggcagcatt
gacacaggcgagagcccggtgagcgcagggccagcggcccccattgaacaggcccagtca
gtcatcccctcccagggtgacctgctgggagacctgctcaacctggacctgggtcccccc
gtcaacgtgccccagcagtcctccatgcagatgggtgctgttgacctgctgggcggaggc
ctcgacagcctgttggggggagacctgggaggaggtgttgggggaagtccagcagtggga
cagaactttatcccctcgtcagttcccaacacattcgccccatcgcccactcctgcagtg
ctcagcagtggcctcaacgacctgtttgagctctccacaggcatggccatcaccacagga
ggctatgtcaccccaaagtctatatggctgcctgcagtgaaagctaaagggctagagatc
tcaggcacattctcccgccgacagggccaaatgtacatggacatgaccttcaccaacaag
gccctgcagcacatgaccgactttgctatccagttcaacaagaacagtttcggagtgatc
cccaccacccctctgcccatccacactccactgatgcccagccagagtattgaagtttcc
ctgcctctcaacaccattgggccagtcatgaagatggacccactgaacaacctacaggtg
gctgtgaagaacaacattgatgttttctacttcagcgggcttatcccactcaacattttc
tttgtggaggacggtaaaatggagcgacaggtgttcctggcaacctggaaagacatcccc
aatgagaacgagctgcagtaccagatcaaggagtgccacttaaacgcagacactgtgtcg
gggaagctgcagaacgacaacatttacaccatcgccaagaggaacgtggagggccaggac
atgctctaccagtcactcaagctcaccaatggcatctggatcctggctgagctccgcatc
caacccggcaaccccaactacacgctgtccttgaagtgccgggctcctgaggtgacccag
tatgtctaccaggtgtacgactcagtcctgaagaactga
DBGET
integrated database retrieval system
