Oncorhynchus tshawytscha (Chinook salmon): 112257955
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Entry
112257955 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112257955 isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112257955
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112257955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
IL4_i_Ig
Ricin_B_lectin
RicinB_lectin_2
Barttin
Motif
Other DBs
NCBI-GeneID:
112257955
NCBI-ProteinID:
XP_024287692
LinkDB
All DBs
Position
LG09:39577113..39648013
Genome browser
AA seq
2117 aa
AA seq
DB search
MSNMKRQSSWQEDIARNFSRLFQRTRSQEPEKTEESNISGQENPVSSNLSSETNEGETSL
HQEDLELSKAFQGTEEKGDGREEGVPGEALEDEERGRKEKGGEGSSSILDDAGGSSEDQP
LAPPPSVDSPCSPVSPLGPGSPTPPPLDAFFRRLGSLFHFKAEPTRGAQPQEEQQQAEEG
GEGQEEEEEKTALAVVSVEPDLSGMTCGAEVDQDHCDSAGRLTGNKDTRHTETEDRREGA
SDLPGVAMSTRSQTHTDLETPALEETQTEGLREGCGEGETAADSGPLREGEAEVDEQHQR
RLALACLPVVTYGTYRGQRERRRIMQRHQVQVDFPISEGDEALHERGSTSGGEGSPLVGV
TPSTLELTISKQSDIQTISTNQIRAPTSETNERGAWTSETDSAVLGPTGLGSSHIPLTMQ
TAERAGSQSAFPLHREAGLPTVGAQAKDFLSGAGSVTGTPPPPTPTEDFVDAGTSTAGSE
THSGEQSLRDRITHAEMASEDTHRDTDRDRDTELSEQTETLSAHCVQTGSPSVAAAWLSE
PPGTGGTAQHTHLPAAVFDVDGSQLAPQPISLSASLASADESQGPMPATRHSDSGDALDS
GTGAGLDCFESGEEEGDVGPSDDLFGQALHLESKMMVDNIVRNALAALERIESSELEGDE
AFQKASEEIYLVLPAGREEEGMEQSFETDKLLEVRPSVRGDDKHPSAFPAEQTLSLNPNP
LAEGPRSTPSSGYESIAGSDTDIRSSPGPACESSAPTICASDHRQGEHCAEGTPGTGHQL
KVKGQQLMDANANEHPQGEEDSQPNGAITSEYSGNKHQGDVLPRLSGGVSHEKPGIHGNG
GDIIQITRASHEYESVSGKTNENKDQVLGTSGDNGCNAVLGVKETPVGDRVVHVAKDDIE
SNRHSPKQDGKAQYGPVSVSNNSESPNKLNSTLNDNTSFKNQTAFPETDLLRKGSKPEAK
GNSETDLMSVRPKHAQNSLQPSQVRHAKGLRPIACITLHDENQESGPEITLNVPQTETNG
SNGTMVSGDQGFVLVETYLASVVSEGSDSGGEEDGADSRPTGTICMDPYSSMRLPKDLST
SEGLVSNSAPGSGNEDMPQRSSVRAYRCDVSPQQQSQDSETPGHSGAGSAAAAMAGFHQD
LSSRLAGLHATGATGGRRAPALEPLLPLLPVPQLAFHDMEVSGFSIIDEEEETDAVFVND
TGPMLSPTARRAKAYPFSLSPIVEEDSLRSEETVEGGLSRDDRGLMVPPATEELRSLSGG
VGMEQLASSSSLSILSLLQSVSERLQSSGYSDTDADLEEPFIPPLRRPLWDFFNSGQAEG
EEGDGQGMDGDQSSKQEGPGFLTLPTDPFTMGPREGYPTEDVNNLPTQKPADSPMNQYLK
SAQPVLPEPDDDNGEHHVKLIPRLSDNKCPSTATDMGENWSCGKVIPRPTLMNIFDGVTF
SGERRTIHADQEDSGMVFPQGASVRVLGGCWLLYLEPGFQGPWVLLEEGETVLSHQPGQQ
QASQGVKNKPTSITIGSIRRLVKDDSTPEIHLLPIGAPGGATEHLHSKEDILGTRGGPIH
LSNLTVKSGCWLAYDNPGFHGNYAIMEAGGSPTPGAGHPQVAAVRSLRPLRMSGLRVRRP
LDPKLLVFEQPHFQGRSGELGGHTPSLGAVAGLKGALSLRVIGGVWVGYTGEDYTGWQYL
LEEGEYSDCADLGGADHPLLLSFRFLQADFIEPSVSLQEETGCPGDGGRNILDLDIPDLE
KAGATEKTTAISVKSGVWVAYSERCFSGEQCILEKGKHPATLHWGGNYGAAKSIRPIRLE
LCGTGEPKVLLRAYSQPHYGGVSEEYEGEAGHCGSPSPMSFRVIRGNWLLFDEDGYCGNQ
YVLGEGLYPDLISCGCVDTSVKSLRPIPYSFSDPSISLFSLDYLEGLKMVAVTPTEHMKD
FFTQSLRVDSGLWVVYEYSHYKGRQMLLQPGELPVWGEHSGWDTIASLRPLKQSVLCVVS
LQPRLYVEVRSRALGSVLTSEIVQDDLSLARVSLSPACSLDTQRWLFTGGLLCCKASKAC
LSVIGGKATVGARVALWAEHGRTHQRWSLNHNGTISSHLNHKLVLDFRGRTSFERDHLVV
NEFAADQATQFWDMELV
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacatgaaaagacaaagttcatggcaggaggatatcgcccgaaacttttccaga
ctatttcaaagaactagatctcaagaacctgagaaaacagaggaaagcaacatcagtggc
caggagaatccagtcagcagcaacctcagcagtgagaccaatgaaggggaaacatcgctg
caccaagaagacctggagctgtccaaggcattccaaggcacggaagaaaagggagacgga
agagaggaaggagtgccaggagaggcactggaggacgaagagagagggagaaaggagaaa
ggaggagagggcagcagcagcatattggacgatgctggggggtcctccgaggaccagcct
ctcgccccgcccccctcagtggactccccttgctctccggtgagccccctggggcccggc
tctcccacacctccccctttagatgccttcttcaggagactagggagtttgttccacttc
aaggctgaaccaaccagaggagcccagccgcaggaggaacagcagcaggcagaggaggga
ggagaaggacaagaggaggaggaggagaagacagcattagcagtggtgtctgttgagcca
gacctctcaggaatgacatgtggtgcagaggtggaccaggaccactgtgactctgctggg
aggctgacgggaaataaggacactcggcacacagagacagaggacaggagagagggagcg
tctgacttacctggtgtagcgatgtccacacggagtcaaacgcacacagacctggagaca
ccagccttggaggagacgcagacggaaggcctcagggaaggatgcggagagggcgaaaca
gcggcagacagcggcccgttgcgcgaaggtgaggcggaggtggacgagcagcatcagcgg
cggctggccctggcctgtctgcctgtggtgacgtacgggacgtaccgtggccagagagag
agacgcaggataatgcagaggcaccaggtgcaggtggacttccccatctcagagggggat
gaggccctgcatgagaggggttcaacctcagggggggagggcagccccttggttggggtg
acaccctccactttagaactcactatttcaaagcagagtgacattcagaccatatcgacc
aatcagattagagctccaacctcagagaccaatgagagaggagcttggacttccgaaaca
gactctgctgttttgggtccaactggacttggctctagtcacattccactaacaatgcag
acagcagaaagggctgggagtcaaagtgccttccctttacacagggaggcaggcctgcct
actgtaggagcccaggccaaggactttctctctggggctggctcagtcacaggcacccct
ccccctcccacacccacagaggactttgttgatgccgggacgagtacagcaggcagtgag
acccacagtggggagcagagcctgcgggatagaatcactcatgcagagatggccagtgag
gatacacacagggacacagacagggacagagacacagagctgagtgagcagacagaaacc
ttatctgcacactgtgtccagactgggtcaccttcagtagctgctgcgtggctcagcgag
ccgccaggcaccggggggactgcgcagcacactcatctgcctgctgctgttttcgatgtc
gatggaagccagctggctccgcaacccatttcactgtccgcctcgcttgcatcagcggac
gaaagccagggacccatgccagcaactaggcactccgattctggggacgcattggattca
ggcactggtgctggactggactgctttgagtcaggggaggaggagggggacgttggtcct
tcagacgatctgtttggccaggcccttcatttggagtctaaaatgatggtggataacatt
gtgaggaatgctctagcggccctggagagaatagaatcctctgagttggagggggatgaa
gcgttccagaaggccagtgaggagatttacctggtcctacccgcaggacgagaggaggag
ggcatggagcagtccttcgagacggataagctcctggaggtaaggccttcagtgaggggt
gatgacaaacacccctcagccttcccagcagaacagaccctctcgttgaaccctaaccct
ctggcggagggccccaggtctaccccctcctcggggtacgagtctatcgcaggctcggac
actgacatcaggagcagccctgggccggcctgtgagagcagtgcacccaccatctgtgcc
tcagaccacaggcagggagaacactgtgccgaggggaccccaggcaccggtcaccagtta
aaggtcaaaggtcaacagctaatggatgctaatgctaatgagcatccacaaggggaagag
gattcccagccaaatggtgctatcacatctgaatacagtggcaataagcaccagggagat
gtgttgcctcgcttgagtggtggagtgtcccacgagaaaccaggtatccatggtaatggt
ggggatattattcaaataacgagagcgagtcatgagtatgagtctgtctcagggaaaaca
aatgaaaacaaagatcaggtgctcggcacttcaggggacaatggttgtaacgcggtgcta
ggcgttaaagaaacaccagtaggagacagagtagtccacgtagccaaagatgatatcgaa
agcaatagacatagtcctaaacaagatggtaaggctcaatatggtcctgtttctgtgtcc
aataactctgaaagtcctaataagctcaacagcactctgaatgacaatacttccttcaaa
aaccaaacagcatttcctgagactgatctgcttaggaaaggttccaaacctgaagctaag
ggcaattctgagacagaccttatgtcagtcagaccaaaacacgcccaaaactccctacaa
ccatctcaagtcagacatgctaaagggttgaggcctattgcctgtataactcttcatgat
gaaaaccaagagagcggtcctgaaataacgctgaatgttcctcagactgagaccaatggg
tcgaatggcactatggtcagtggggatcaaggctttgtcctggttgagacttacttagcc
tctgtagtctcagagggctctgactctggaggtgaggaggatggggctgacagcagaccc
acaggcaccatctgcatggacccttattcctcaatgagactccccaaggacctgagcacc
tcagagggcctggtgtctaattcagcccctggctccggtaacgaggacatgccacagagg
agctcggtgagagcatatcgctgcgatgtctctccgcaacagcagagtcaggactcagag
acaccaggacacagtggtgcaggttcagcagctgcagctatggcagggtttcaccaggac
ctgagcagcaggctcgctggactccatgctacaggggctactggaggccggcgagcccca
gccctggaacctctcctccccctcctcccagtcccccagcttgccttccatgacatggag
gtgagcggtttttccattatcgacgaggaagaggagactgatgctgtgtttgtcaatgac
acaggccccatgctgagccccacggcgcggcgggccaaggcctatcccttctctctgtcg
cccatcgtggaggaagacagtctccgcagcgaggaaacggtggaggggggcctgtcgcgg
gatgacaggggactcatggtgccaccagccactgaggagctgaggagtctgagcggaggt
gtggggatggagcagctggcctcgtcctcctctctgtccatcctgtccctgctgcagtcg
gtcagcgagcgcctgcagtccagtggctactccgacacagatgcagacttagaggagccc
ttcatccctcctctacggcggcccctatgggacttctttaacagtggccaggcggagggt
gaggagggggatggccagggaatggatggagaccaaagtagcaagcaggagggcccaggc
tttctgacacttcctactgatccattcactatgggacctcgagaagggtatccaacggag
gacgtgaacaatctgcccacccaaaagcctgcagattcgcccatgaatcagtatttgaaa
tcagcgcagccagtgttgccagagcctgatgatgacaacggtgaacatcatgtcaaactc
attccgcgcctcagtgataataagtgtccatccacagcaaccgacatgggggaaaattgg
agttgtggaaaggtcatcccaaggcctactctgatgaacatctttgatggtgtgacattc
tctggggagaggcggactatccacgcagaccaggaggattctgggatggtgtttccacag
ggtgcctctgtgcgagtcttgggaggatgctggcttctgtacctggagccggggttccag
ggcccctgggtgctactggaggaaggggagacggtactgagccaccaaccgggccagcag
caggccagccagggggtaaagaacaagcccaccagcatcaccatcggctccatcagaaga
ctagtgaaggatgacagcactccagaaattcatctgcttccgatcggagcgccaggtgga
gccacggagcatctccactcgaaagaggacatcttgggaacacgtggtggacctatccac
ctgtcaaacctgactgtcaagtctggctgttggcttgcctatgacaaccctggtttccat
gggaactatgcgattatggaagcaggtggctccccaacacctggcgctggtcatccccag
gtcgccgctgtgaggtcactgagacccctcagaatgagtggactcagagtgaggagacct
ctggatcctaagctgttggtgttcgagcagccccacttccaggggcggagcggagagctg
ggaggccacacccccagtctgggagctgtggctgggttgaagggggcattgtcgctacgg
gtcattggtggagtatgggtgggctacactggagaggactacacagggtggcagtattta
ctggaggagggagaatacagtgactgcgcagatctgggtggagccgatcaccctctgctg
ctctccttccgcttcttacaggcagacttcatagagccctcagtgtcactgcaggaggaa
actggctgtcctggagatggggggaggaacattttggatctggacatccctgatctggag
aaagctggagccactgagaagaccactgccatctctgtgaagagtggagtatgggtggcg
tatagcgagcgatgcttcagcggagagcagtgcatactggagaaaggcaaacatcctgcc
actctgcactggggtggcaactatggagcagctaagtctatcagacccatacgattggaa
ctttgtggcaccggagaaccaaaggtcttgctgcgggcctacagccagccccactacggg
ggagtgagtgaggagtacgagggggaggcaggacactgtggatctccctcccccatgtcc
ttcagagtcatcaggggaaactggctgctctttgatgaggatggttactgtggaaaccag
tatgtcctgggagagggtctttatcctgacctcatttcctgtggctgtgtggacacttct
gtcaaatcactgaggcccattccctatagtttctccgacccgtccatcagcctgttctcc
ctggattacttagagggcctgaagatggttgccgtaacacccacagagcacatgaaggac
ttcttcactcagtccctgcgggttgacagtggactgtgggtggtgtatgaatatagtcac
tataagggccgtcagatgctgctgcagccaggggagcttcctgtgtggggagagcacagc
ggctgggacaccattgcctccttacggcccctcaaacagtctgtactgtgtgtggtctcc
ctccagcccaggctttatgtagaggtaaggagccgtgctctgggttcagtgctgacctct
gagattgtccaggatgacttgtccctggccagagtgtccctgtccccggcctgctctctg
gacacccagcgctggctcttcaccggagggctgctctgctgcaaggctagtaaggcgtgt
ctgtcagtgatcggagggaaggccacagtgggggccagagtggccctgtgggcggagcat
ggacgcacacaccagagatggagcctgaaccacaacggaaccatctcttcccatctcaac
cacaaactagtactggacttcagaggtagaacaagtttcgagagggaccacctggttgtc
aatgaattcgctgctgatcaggccacacagttctgggacatggagttggtctag
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integrated database retrieval system
