Oncorhynchus tshawytscha (Chinook salmon): 112257981
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Entry
112257981 CDS
T05605
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03265
Virion - Ebolavirus and Lyssavirus
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
112257981
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112257981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257981
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112257981
04090 CD molecules [BR:
otw04090
]
112257981
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112257981
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112257981
Membrane trafficking [BR:
otw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
112257981
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
NCAM1/2
112257981
CD molecules [BR:
otw04090
]
Proteins
112257981
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
112257981
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112257981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
V-set_CD47
Ig_5
Ig_6
C2-set_2
Pur_ac_phosph_N
C1-set
Motif
Other DBs
NCBI-GeneID:
112257981
NCBI-ProteinID:
XP_024287740
LinkDB
All DBs
Position
LG09:complement(40359979..40661878)
Genome browser
AA seq
1073 aa
AA seq
DB search
MLQTRYLIWALLFGYAASLQVEITPMQGEISMGESKFFLCEVVGDVKDIDWYAPNGEKLL
PNRQDILVNRNDESSSTLTIYNANVDNAGIYKCVAKNGDKESQGTVNVKIFQKITFKNAP
SPQEFNEGDDADIICDVVSSPPADIIWKHKGSKIQVAKDVRFKILTNNHLQIRGIKKTDE
GAYTCEARVMTRGEIDLKIIKVIVNVLPSIRTRQSEMNATADVNQSVMLACDADGFPEPT
VTWARNNIVLESDDKYGLNNDGSELIIKDVKKVDEGDYTCIARNKAGEKEEEVSLNVFVQ
PKITYLVNQTASELEEQITLTCEASGDPTPTITWSFGRRIFTEGEQASWTRPETYESLDG
NVVVRSHARVSSLTLKYVQFTDAGHYLCTARNSIGQDQQTMYLEVRYAPKIQGSVTVYTW
EGNAANISCEVLAHPGASVVWFRDGQQLSSTNTTNVKIYNTPAVSYLEVTPDSQNDFGSY
NCTATNMIGAESKEFLLIPADVPSAPAIERVEPFSSTAVVEFEEPDASGGVAILKYRAEW
RMQGEDWTGREYDAEEGLSMITIVGLKPETFYEVKMSAINGKGEGESSSPQNFKTEPVRY
AFTSGIPFHYSNVDSVSSVTPTFIPSTSAALKGEPSPPKLEGKLQTTGNALKVNWIKQDD
GGSPIKHYLIRYRAKHVPDWKPEIRLPNGSEYVVLNSLDWNTEYEVYVVAENQQGKSQPG
TLFFRTAAEPTAIPDTMHSGSGLGTGAIVGILIVVFVLLLVGVDVTCYFLNKCGLVMCIA
VNFCGKSGPGAKSKDLEEGKAAFTKDESKGPIVEVRTEEECTPNHEGGGPTEPNETTPLT
EPEPAADTTATVVDLLPSVATNSEPVTESFSTTQNSPASESTTLTSSAAVPTPVPAESKT
APKTSPKSKPAPVPQSSTAKPSTPASQRATQSDVAPLVDLSEAPKATPSSDPKPPTPTAP
SSKPVKVPSNPPSATADAAPQSQPESVQSPSTTSSQNKDLQIDGLAKDVFDAPGKGSKAP
ADSTAAPAQDDGKIMTGDKSKAPETATEVKKALSEVKTVPNEAAKTNGNESKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaacaaggtatctcatctgggcattgctctttggctatgcagcctccctgcag
gtggagatcaccccgatgcaaggagagatcagtatgggggagtccaaattcttcctctgt
gaagttgtcggagatgtaaaggacattgattggtatgccccgaacggcgagaagctccta
ccgaaccgacaggacatcctcgtgaaccgcaacgacgagtcctcatccactctcacgatc
tataacgccaacgtggacaatgccggcatctacaagtgtgttgccaaaaatggagacaag
gagtctcagggcaccgtcaacgttaaaatcttccaaaagataaccttcaagaacgcccct
tccccacaggagttcaatgaaggggatgacgctgacatcatctgtgacgtcgtcagctcg
cctcctgctgacatcatctggaagcacaaaggctcaaagatccaggttgcaaaagacgtt
cgatttaagatcctgaccaacaaccacctccagatccgaggcatcaagaaaacagatgaa
ggggcgtacacctgtgaggctcgtgtaatgaccaggggagagattgacctaaagatcatc
aaggtcatcgtcaacgtgctccctagcatccgcaccaggcagtcggagatgaatgccacg
gcggacgtcaaccagtctgtgatgctggcctgtgacgctgacggcttccctgaacccaca
gtcacctgggcccgtaacaacattgtccttgagtcggacgataagtacggactgaacaac
gacggctcggagctgataataaaagatgtcaagaaagtggatgaaggagattacacgtgc
atcgcccggaacaaggccggggagaaagaggaggaagtcagcttgaatgtgttcgtgcaa
cctaagatcacctacctggtcaaccagactgcatcagagctggaggagcagatcaccctg
acctgcgaggcctcaggagaccccacccccaccatcacctggagctttggccgcaggatc
ttcacagagggagagcaggcttcttggactcggcctgagacgtacgagagtcttgatggg
aatgttgtggtgcgtagtcacgcacgggtttcctctctcaccttgaagtatgtccagttc
accgatgccggccactacctctgcactgcccgcaactccatcggtcaagaccagcagacc
atgtacctggaagtccgctatgctcccaagatccagggctcggtgacggtatacacctgg
gaagggaacgcagccaacatcagctgtgaggtgctggctcatccgggagcctcagtggtg
tggttcagagatggccagcagctgtctagcactaacaccaccaacgtcaagatctacaac
acaccagctgtcagctaccttgaggtcaccccagattcccagaatgactttggaagctac
aactgcacagctaccaacatgatcggagcagagtccaaggagttcctcctgatcccagca
gatgtgccgtcggcacccgccatcgagcgagtggagcccttctccagcaccgccgttgtg
gagtttgaggagcccgatgccagcggcggcgttgccatcctcaagtaccgggcagagtgg
cgcatgcagggtgaagactggaccggcagggagtacgatgcagaggagggcctgagcatg
atcaccatcgttggcctgaagcccgagaccttctatgaggtcaagatgtccgccatcaac
ggcaagggcgagggcgagagcagctctccccagaacttcaagactgagccagtccgctat
gctttcacaagtggcataccatttcattactctaacgtggactcagtttcgtcagtgaca
ccaaccttcattccttcaacaagtgcagcccttaaaggggagcccagtccccctaaactg
gagggcaagctgcagaccacgggcaacgccctcaaggtcaactggatcaagcaggacgat
ggaggctcgcccatcaaacactacctgataagatacagggctaagcacgttccggactgg
aagccggagatccgcttgcccaacggcagtgagtacgtggtgctgaacagcctagactgg
aacacggagtatgaggtatacgtggtggccgagaaccagcagggcaagtcgcagcccggc
accctcttcttcaggactgcagcagagcccaccgccatcccagacactatgcatagcggc
tcaggcctaggcacaggggcgatcgtggggatcctcattgtggtctttgtgctgctgctg
gtgggcgtcgacgtcacctgctacttcctcaacaagtgcggcctcgtcatgtgcattgcc
gtcaacttctgcggcaagtctggacccggagccaagagcaaggacctcgaggagggcaag
gcggcgttcacgaaggatgagtccaaggggcccattgtggaggtgaggacggaggaggag
tgcactcctaaccatgaagggggggggcctacagagcctaacgagaccacccctctgact
gagcctgagcccgctgctgacactaccgccacggtggtggacttgctcccttctgtcgcc
actaactctgaacctgtcactgagagctttagcacaacccagaacagcccagctagcgag
agcaccactctcacttccagcgcagctgtcccaacccctgtcccggctgagtccaaaact
gcccccaaaacctcccctaaaagcaaacctgcccccgtcccccagtccagcacggccaaa
cctagcacccccgcctcccagcgtgccacccaatctgacgtagctcccctcgttgaccta
agcgaggctcctaaagccacaccctcgtctgaccccaagcccccgacccccacagcccca
tcctcgaagccagtcaaggtcccctccaaccccccctctgccacagccgatgccgcacca
cagagccagcccgagtctgtccaaagcccctccaccaccagcagtcagaataaggactta
cagatagacggcctggccaaggatgtgtttgatgccccaggcaaaggctccaaggccccg
gcagactccactgctgcacccgcccaggacgacggtaaaatcatgacaggcgataaaagt
aaagccccggagacagcgacagaggtgaagaaagccctgtctgaggttaagacagtcccc
aacgaagctgcaaagacaaatggcaacgagagcaaagcatga
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