Oncorhynchus tshawytscha (Chinook salmon): 112258014
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Entry
112258014 CDS
T05605
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112258014
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
112258014
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Bacteroid_pep
Motif
Other DBs
NCBI-GeneID:
112258014
NCBI-ProteinID:
XP_024287829
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All DBs
Position
LG09:complement(44750410..44759229)
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AA seq
559 aa
AA seq
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MAAAAGRYYNEGGRATKRQKTEDGMTTEGYDDPHKTLPSPVVHIRGLVDGIMEADLVEAL
QEFGTISYVVMMPKKRQALVEYEDMNGSCNAVTYAAENQVYIAGHPAFINYSTSQKISRP
GDPDDSRSVNNVLLLTIMNPIYPITSDVLYTVCNNCGPVQRIVIFRKNGVQAMVEFDAVQ
SAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNPSGHDADAEGNWN
NSQDPNANPNKRARPPALLGDHPPEYGGPTGAYHGYHDESGYGPPPPHYEGGRRMGPLMG
GRGRGRGGSYGGPGYGHGPPPPGDYTAHADSPVVMVYGLEPAKINADKVFNVFCLYGNVE
RVKFMKSKPGAAMVEMGDCYAVDRAISHLNNNFLFGQKLNVCVSKQQAIMPGQSYELEDG
SSSFKDFHGSRNNRFTSPEQAAKNRIQHPSNVLHFFNGQPDISVEVFNGVCEELGVKNPS
SIKLFTGKSGATGERSSSGLLEWESINDSMEALAMMNHYQMKNPSKYSDCDNNTTANDTN
GGPYPYTLKLCFSTAQHAN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcagcaggtcgctattacaacgagggtggcagagcaacgaaaagacagaaa
accgaagacgggatgacgacggagggctatgatgacccccataaaacactcccttcccca
gtggtccacatcaggggccttgttgatggcatcatggaggcagatctagtggaagccctg
caggagtttgggaccataagttatgtggtcatgatgcccaagaagcgccaggccctggtg
gagtacgaggacatgaatggatcctgcaatgctgtgacctatgcagccgagaaccaggtc
tacattgccgggcaccccgccttcatcaactactccaccagccagaagatctcccggccc
ggagacccagacgactcgcgcagcgtcaataacgtgctgctgctcaccatcatgaacccc
atctaccccatcacctcggatgtactgtacacagtctgtaacaactgtgggcccgtccaa
aggattgtcatcttcaggaagaatggcgttcaggccatggtggaatttgatgctgtacaa
agtgcccagagggcgaaagcctctctaaatggggcagacatctactcgggctgctgcaca
ctgaagattgagtatgccaagccaacccgcctcaacgtgttcaaaaatgaccaggacacc
tgggactacacaaaccccaacccgagtggccacgatgctgacgctgaaggcaattggaac
aattcacaagatcccaatgccaaccccaacaagcgtgcgaggccgccagctttactagga
gaccaccctccagagtatggcgggccgactggtgcttatcacggctaccatgatgaaagt
ggctatgggccccctcctcctcattatgagggcgggcgccgcatggggcctctgatggga
gggcgtggccgcggacgtggtggaagctacgggggacctgggtacggacatggcccacct
ccccccggtgactacaccgcccacgctgactcccctgttgtcatggtgtacggcctggag
cccgcgaagatcaacgccgacaaggtcttcaacgtcttctgtctctacggcaatgtggag
cgggtgaagttcatgaagagtaagccgggggcagccatggtggagatgggcgactgctac
gctgtggaccgtgccatcagccacctcaacaacaacttcctgtttggacagaagctcaac
gtctgtgtgtccaagcagcaggccatcatgcctggtcagtcctacgaactggaagacggc
tccagcagcttcaaggacttccatggctcccgcaacaaccgctttacctccccggagcag
gcggcaaagaaccgcatccagcatcccagcaacgtcctgcacttcttcaacgggcagccc
gacatctccgtggaggtcttcaatggggtctgtgaggaacttggtgtgaagaacccatcc
agcatcaaactcttcactggaaagagtggcgcgacaggtgagaggagctcatccgggctg
ctggagtgggagtctataaacgattccatggaggctctggccatgatgaaccactaccag
atgaagaaccccagtaagtactccgactgcgataacaacaccaccgctaatgataccaac
ggtggtccgtacccttacacactgaagctgtgtttctcaactgcgcagcatgccaactag
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