Oncorhynchus tshawytscha (Chinook salmon): 112258034
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Entry
112258034 CDS
T05605
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112258034 (capns1a)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C2: calpain family
112258034 (capns1a)
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
112258034
NCBI-ProteinID:
XP_024287857
UniProt:
A0A8C8MKT6
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All DBs
Position
LG09:complement(45047242..45056216)
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AA seq
216 aa
AA seq
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MFLAKRLIGGILDVVSNIDPAVFVPSDPPAPRRPLAYAEQNESDEERQFRKVFQQLAGDD
MEVSPTELMNILNRIISKHGDLKTDGFSIESCRSMVAVMDCDSTGKLGFHEFKHLWNNIK
KWQGVYKTYDTDGSGVIGADELPNAFRAAGFPLNDELFQMIIRRYSDENGNMDFDNCIGC
LVRLDAMCRAFKTLDKGNNGTIKVNVQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggccaaaagactcatcggtggcattcttgatgtcgtaagcaatattgatcca
gctgtgtttgtgccctctgacccacccgcaccacgaaggccacttgcgtacgcagagcag
aatgagagtgacgaggaaagacagtttcgcaaagtcttccagcagttggctggagatgac
atggaggtgagcccaactgaattgatgaacatcttgaacagaattatttccaaacatggt
gacctgaagacagacgggtttagcattgagtcctgcaggagcatggttgcagtcatggat
tgtgacagtactgggaagctcggattccatgagttcaaacacctctggaacaatatcaag
aaatggcagggtgtgtataagacttatgacactgatggctctggggttattggtgcagat
gagcttcccaatgctttcagggcggcaggctttcccctcaatgatgagctgttccagatg
atcattcgcagatacagcgatgagaatgggaacatggattttgacaactgcattggctgc
cttgtgagactggacgctatgtgccgtgccttcaaaaccttagacaagggtaacaatgga
actatcaaggtcaatgttcaagagtggctccagttgacaatgtactcctaa
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