KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112258039
Entry
112258039         CDS       T05605                                 
Name
(RefSeq) cullin-5 isoform X2
  KO
K10612  cullin 5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112258039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112258039
   03400 DNA repair and recombination proteins [BR:otw03400]
    112258039
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     112258039
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112258039
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 112258039
NCBI-ProteinID: XP_024287862
LinkDB
Position
LG09:complement(45669650..45716445)
AA seq 802 aa
MFVFLNMATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWD
DKGPAKIHQALKADILDFIKQAQVRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQL
EITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS
QLVIGVRESYVNLCSNPDNKLQIYRDNFEKAYMDSTERFYRTQAPSYLQQNGVQNYMKYA
DTKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIRRNETESEY
GRSAPGTKGSASSELHLMFSLMDKVPSGIEPMLKDLEEHIMSAGLADMVASAETITSDSE
KYVEQLLTLFNRFSKLVKDAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKT
QPESKCPELLANYCDMLLRKTPLSKKLASEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHL
TRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQNFKECHKHNK
LALSADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMS
NGIITFKNEVGQYDLEVTTFQLAVVFAWNQRPRERISFENLKLATELPDAELRRTLWSLV
AFPKLKRQVLSYDPVVGSPKDFAEGTLFYVNQEFSLIKNSKVQKRGKINLIGRLQLTTER
MREEENEGIVQLRILRTQEAIIQIMKMRKRITNAQLQTELVEILKNMFLPQKKMIKEQME
WLIEHKYIKRDETDLNTFIYMA
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgttcgtattcctgaacatggcgacgtctaatttgctaaagaacaaaggctccctccag
tttgaggacaagtgggatttgatgcgtcccatcgttctgaagctgctccgtcaggagtca
gtcaccaagcagcagtggtttgacctcttctcagacgtccatgcagtatgcctatgggat
gacaagggaccggccaagatccaccaagccctgaaggcggacatcttagacttcatcaag
caagcacaagtgcgggtgttgagtcaccaggatgacacggcactgctgaaggcctacatc
gtggagtggaggaagttcttcacacagtgcgacatcctgcccaaacccttctgccagctg
gagatcacgctcatgggcaagcagggcagcaacaagaagtctaacgttgaggacagcatc
gtacggaagctcatgctggacacgtggaatgagtccatcttctccaacatcaagaacagg
ctgcaggacagcgccatgaagctggtgcacgccgagcgcctgggggaggccttcgactct
cagctggtcatcggcgtcagggagtcctacgtgaacctgtgctcaaacccagacaataag
ttgcagatctacagggataactttgagaaggcttacatggactccactgagagattctac
agaacacaggccccctcctacctgcagcagaacggagtacagaactacatgaaatacgca
gacactaagttgagagaggaggagaaacgggcgttgcgctatttggagacaagacgtgaa
tgtaactctgtacaagcactgatggagtgttgcgtgaacgccctggtgacgtccttcaag
gagaccatcttggccgagtgtccagggatgatcaggcgaaacgagacagagagtgagtac
ggccggagcgctcccggcaccaaaggctcggccagctcagagctccatctcatgttctct
ctgatggacaaggtgcctagtggcatcgagcccatgctgaaggacttagaggaacacatc
atgtctgctgggctggccgacatggtggcctccgccgagaccatcacctcggactctgag
aagtacgtggagcagctcctcaccctgttcaaccgcttcagtaagctggttaaagatgcc
tttcaggacgaccctcgcttcctcacagcccgagacaaggcttacaaagcagttgtgaat
gatgctactatttttaaattggaacttccgctgaagcagaaaggggtggggctgaagact
cagccagagtccaagtgtccagagttgctggccaactactgtgatatgctgctgaggaaa
accccgctgagcaagaaacttgcatctgaggagatcgaggccaagctcaaggaagtgttg
ctggtgttgaagtacgtgcagaacaaagacgtgttcatgcgctaccacaaagcacatctg
acccgacgccttatcctggacatctccgctgacagcgaaatcgaggagaacatggtggag
tggctccgggaggtaggcatgcccgctgactacgtgaataagctggctcggatgttccag
gacatcaaggtgtccgaggacctcaaccagaacttcaaagagtgtcacaaacacaacaag
ctggccctatcagcggactctgtcaacatcaagatcctgaatgcgggggcgtggtcgcgg
agctccgagaaggtgtttgtgtcactgcccaccgagctggaggacctgatccccgaggtg
gaggacttttacaagaagaaccacagtggcaggaaactgcactggcatcacctcatgtcc
aatggcattatcacatttaagaatgaggtgggccagtacgacctggaggtgaccacattc
caactggctgtggtgtttgcctggaaccagaggcctcgggagaggatcagctttgaaaac
cttaagctggccacggagctgcctgatgccgagctccgacgcaccctctggtccctggta
gcgttccccaagctaaagcggcaggtgttgtcctacgacccagtggtgggttcgcccaaa
gactttgcagagggcaccctcttctatgtcaatcaggagttttcactaataaaaaactcc
aaggtccaaaaaagggggaagattaacctaattggccggcttcagctcaccacagagcga
atgagggaggaggagaacgagggaatcgtccagctcaggatattgagaacacaggaggcc
atcatccaaatcatgaagatgcgcaagcggatcaccaatgcccagctgcagacagagctg
gtcgagatcctcaaaaacatgttcctacctcaaaagaagatgatcaaggagcagatggag
tggctcattgagcacaagtacatcaagcgggacgagacggatctcaacaccttcatctac
atggcataa

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