Oncorhynchus tshawytscha (Chinook salmon): 112258112
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Entry
112258112 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112258112
04082 Neuroactive ligand signaling
112258112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112258112
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112258112
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112258112
NCBI-ProteinID:
XP_024288001
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Position
LG09:complement(52537525..52623713)
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AA seq
524 aa
AA seq
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MAVLRIRKMSCFGLWTFPVIVAVVCAQSVNDPSNMSIVKETVDRLLKGYDIRLRPDFGGP
PVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYSLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVDHKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKAAVANNEKMRMDPN
KWLVGNVVQRDDTLYARMKQRDIDAHDSMWEPIFVDDAAMGLGDQKNKMDPHENILLGTI
EIKNEMGASELTLGLSDPRSTMLTYDSSTLQYRKAGLQARHNFGRNTLERHVTQKKSRLR
RRASQLKINIPDLTDVNSIDKWSRMIFPTVFSLFNIIYWLYYVN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttgagaataagaaaaatgagctgctttgggctttggacctttcctgtaata
gtggccgtggtctgtgcgcaaagtgtcaatgaccctagcaatatgtcaatcgtaaaagaa
actgtggatagactgttgaaaggatatgacattcgcttgaggccggatttcggaggtccc
cctgtgggagtggggatgaatatagacatagccagcatagacatggtatctgaagtcaat
atggactatacattgactatgtatttccagcaagcttggcgagacaagcggttatcctac
tcagagattcccctcaatctcaccctggataaccgggtagcggatcagctgtgggtcccg
gacacctacttcctaaatgacaagaagtcttttgtccatggtgtcactgtgaaaaacaga
atgattcgactgcatccagatggcactgtgctctatagcctgaggatcaccactacagca
gcttgtatgatggatctgagacgatatccactggacgagcaaaactgcacattggagata
gagagctatgggtacaccactgatgacatagagttctactggcgaggaggtgacaacgct
gtgacgggggtggagagaatagaactcccccagttctccattgtggaccacaaactcatc
tccaagaatgttgtcttctctacaggatcctaccctcgactctccctcagcttcaagcta
aaaaggaacatcggctatttcatcctgcagacctacatgccctctatcctgatcacaatc
ctctcctgggtctccttctggatcaactatgatgcctctgctgccagagtggctttagga
atcaccactgtgctgaccatgaccaccatcaacactcacctgcgggagacccttcctaaa
atcccttatgtcaaggccattgacatgtacctgatgggctgcttcgtcttcgtttttctg
gccctgctggagtacgccttggtcaactacatcttcttcggcaggggaccccagcgccag
aagagggcggctgagaaagcagctgtcgccaacaacgagaaaatgagaatggatccaaac
aagtggttggtgggaaatgtagttcagagagacgatactctgtatgcgagaatgaaacag
agggatattgacgctcatgactcaatgtgggaaccaatctttgtggatgacgcagcgatg
ggactaggcgatcaaaagaataagatggacccacatgaaaacattctactgggcacaata
gaaattaagaatgagatgggagcgtcggagctgacccttggtctcagtgaccccaggagc
acaatgttaacttatgacagctccaccctgcagtaccgcaaagcagggctgcaggccagg
cacaactttggacgcaacactctggagcggcatgtaactcagaagaagagccggctacgg
aggcgtgcttcccagctgaagattaacattcccgacttaactgatgtaaactctatcgac
aagtggtcgagaatgatcttccccactgtattttccttgttcaacattatctattggctc
tactacgttaactaa
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