Oncorhynchus tshawytscha (Chinook salmon): 112258113
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Entry
112258113 CDS
T05605
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112258113 (gabra6b)
04082 Neuroactive ligand signaling
112258113 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112258113 (gabra6b)
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112258113 (gabra6b)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
112258113
NCBI-ProteinID:
XP_024288003
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Position
LG09:52632697..52670036
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AA seq
451 aa
AA seq
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MAFVFTFFFLSCVSNVWGNNPKSTEMDGNIYLDNITRILDRLLDGYDNRLRPGFGGPVTE
VKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTF
FRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSY
AYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQ
RKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV
SYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKVAAIKAAQEAAEAGRSDGE
SSSDASSMLKKRMNSTTHFERPAEVFPNPPVNAQTFLQQGSAVPSNNLLTGTSIIDKYSR
ILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgttttcactttctttttcctgtcctgtgtgagcaatgtttggggaaataat
ccgaaatcgaccgagatggatgggaatatctatttggataacattacacgtatattggat
agattactagatggatatgacaacagactgcgacctggatttggaggtccagttaccgaa
gtcaaaacagacatctttgtaaccagctttggtccagtgtcagatgttgagatggagtac
accatggacgtatttttccgtcaaacgtggattgacgagaggttgaaattcgagggcccc
atcgagattctgcggctcaacaacctcatggtcagcaagatctggacgccagacacattc
ttccggaatggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgc
atcatgcagaacggaactatcctctacaccatgagattgactataaatgccgagtgtccc
atgcgactgatgaacttccccatggacggccatgcctgtcctctcaagtttggtagttat
gcctaccccatgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaa
gtaccagaggagtcctccagcttgctacagtatgatctaataggacagacagtgtccagt
gagaggttaaaatccaacacaggtgaatatgtaatcatgactgttcacttccaccttcaa
aggaagatgggcttcttcttgattcagacatacattccctgtatcatgacggtgatcctg
gctcaggtctctttttggatcaataaggaatctgttcctgctcgaactgtatttggcatt
accactgtgctaaccatgaccacactcagcatcagcgcccgccactctctgcccaaagtt
tcctacgccacggccatggactggtttattgccgtatgtttcgccttcgttttctcagcc
ctcatcgagtttgcagcagtcaactacttctccacgctgcaggccaaccgggagctccgc
aaggtggccgccatcaaggcagcccaggaggctgcagaggccgggaggagtgacggggag
tcctcttcggacgccagcagtatgctgaagaagaggatgaactctacgactcactttgag
aggccagcggaggtgttccctaaccctccagtgaatgcccagaccttcctccagcaaggc
tcagccgtgccgtccaacaacttactgacaggcaccagcatcatagacaagtactcacgc
atcctcttccctctgtcgttcggggccttcaacctagtctactggatcgtctatcttacc
aaggacaccatggagatgacaagagacagcgtgtga
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