Oncorhynchus tshawytscha (Chinook salmon): 112258114
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Entry
112258114 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112258114
04082 Neuroactive ligand signaling
112258114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112258114
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112258114
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
112258114
NCBI-ProteinID:
XP_024288005
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All DBs
Position
LG09:52695034..52730071
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AA seq
462 aa
AA seq
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MGGRTGAVILCVWACLLMANVLCGKSSGQNGQTDEQKDNTTVFTRILDRLLDGYDNRLRP
GLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMSVLRLNNLMAS
KIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHA
CPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVV
MTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS
ARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKE
SLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNS
VSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggacaggagcggtcatactatgtgtctgggcctgtttgctgatggccaat
gtgctttgtgggaaaagctctggacagaatggccagacggatgagcagaaagacaacact
acagtgttcacccggatcctagaccgtctcctggatggctatgacaatcgtctcagacca
gggttgggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattgggccc
gtctcggaccatgacatggaatacaccatcgacgtgttctttcgtcaaagctggaaggac
gagcggctaaaatttaaaggtccaatgtctgttctccgtttgaacaacctaatggccagt
aaaatctggacccctgacacattctttcacaatggcaagaagtctgtggcccacaacatg
actatgcccaacaaactcctacgaatcaccgaggagggaactctgctctacactatgaga
ctgacagtaagggcggagtgtcccatgcacctggaggacttccccatggacgcccatgct
tgtccactgaagtttggcagctatgcttacaccagagctgaggttgtgtacgtgtggacg
agaggggcagcccagtctgtcgtggtggctgaagatggctctcggctcaaccagtatgat
ctgatggggcaaagtgtggactctggggttgtccagtccagcacaggagagtatgttgtc
atgacgacacacttccatctgaagaggaagattggttattttgtcatccagacgtacctg
ccctgcatcatgacagtaatcctatcccaagtgtcgttctggctcaacagagagtccgtc
ccagccaggactgtgttcggagtgacaactgtgctgaccatgaccaccctcagtatcagc
gctaggaactctctcccaaaagtggcctacgccacagccatggactggttcattgcagtc
tgctatgcttttgtcttctctgccctcattgagtttgctacagtgaactatttcacaaag
aggggctatgcctgggacggaaaaagtgtggtgccagagaagcaaaagaagaagaaggag
tccctcctgaagaagaacaacaccaccgcctacaccgccgccactgccacagccttcgct
ccaaacattgccagggaccctggtttggccaccattgccaaaagcgcaccccctcccccc
accgagcccaaggaggaacccaagcccaagccaccagaggccaagaagaccttcaacagc
gtcagcaagatcgacaggatcgccagaatagccttcccgttactcttcggaacctttaac
ctggtctactgggcaacttacttgaataaaaagcccaagttacaggggatgaccccggga
tcccactaa
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