Oncorhynchus tshawytscha (Chinook salmon): 112258115
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Entry
112258115 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2-like isoform X2
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
otw04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112258115
04082 Neuroactive ligand signaling
112258115
04519 Cadherin signaling
112258115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112258115
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112258115
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
112258115
NCBI-ProteinID:
XP_024288009
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All DBs
Position
LG09:52764850..52834909
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AA seq
476 aa
AA seq
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MVIMAPTNLASKCSTAMANASFPVKLFLWVFLFAHLPTSSIQTENDDDEVTNKTWVLTPK
VYESDVTNILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQT
WYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILY
TLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQF
SFVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA
VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV
SNRKPSTKKDKKNKNPLLRLFSSKTPTVDIRPRSATAIQMNNATHMQERDEEYGYECLDG
KDCTSFFCCFEDCRSGAWRHGRLHIRVAKIDSYARIGFPTAFGLFNLVYWISYLYL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtgataatggctcctacaaatttagcatctaaatgctcgacagcgatggcgaatgct
tccttccctgtgaagctatttctctgggtgtttttattcgctcatcttcctacaagctcc
atccagactgaaaacgacgatgatgaagtgacaaacaaaacgtgggtgttgactcccaaa
gtgtacgagagcgatgtcaccaacatcctaaacagcctactagatggctacgataacaaa
ctgcgaccagatataggagtcaaaccaaccgtgatccacacggacatgtttgtgaacagt
atcggcccagtaaatgctatcaatatggagtacaccatcgacatcttttttgcccagacg
tggtatgaccggagattgaagttcaacagtaccatgaaggtcctgcgtctcaacagcaac
atggtgggcaagatctggatccccgacaccttctttcgcaactccaagaaggccgacgcc
cactggatcaccacgcccaatcgcatgcttcggatctggaacgatggacggatactctac
acactgcggttgactattgatgccgagtgccagcttaaactgaacaactttccaatggat
gagcactcctgtcccctggagttttcaagctatggttaccccagagaggagatagtgtac
aagtggaagaggagctccgtggaggtgggagacatccgctcctggaggctctaccagttc
tcctttgttggcctgaggaacacctccgagatcgtcaggaccgtgtcaggagactacgtt
gttctgacagtcttcttcgacctgagcaggaggatgggttacttcaccattcagacctat
atcccctgcaccctcatcgttgtcctctcctgggtctctttttggatcaacaaggatgct
gtacctgctagaacatccttaggcattaccactgtgctgaccatgactacgctgagtacc
atagccaggaagtcgctgcctaaggtatcctacgtgacggccatggacctctttgtgtcc
gtgtgcttcatctttgttttcgccgctctgatagagtatggaacactgcactactttgtg
agcaacaggaagccaagcacaaaaaaggacaagaaaaataaaaacccgctcctccggctc
ttttcctcaaagacacctacggtggacatacgccctcgctcagccaccgccatccagatg
aacaacgccacccacatgcaggagcgggatgaggagtatggctacgagtgcctagacggc
aaggactgcaccagcttcttctgctgtttcgaggactgccgctccggggcctggcggcac
gggcggttgcatatccgtgtcgccaagatagactcgtacgctcgcatcggtttccccacc
gctttcggtctctttaacctggtttactggatctcatatctctatctctag
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