Oncorhynchus tshawytscha (Chinook salmon): 112258130
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Entry
112258130 CDS
T05605
Name
(RefSeq) leucine--tRNA ligase, cytoplasmic-like
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112258130
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112258130
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112258130
03029 Mitochondrial biogenesis [BR:
otw03029
]
112258130
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
112258130
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112258130
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112258130
Prokaryotic type
112258130
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112258130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
112258130
NCBI-ProteinID:
XP_024288038
LinkDB
All DBs
Position
LG09:complement(54200555..54227264)
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AA seq
1178 aa
AA seq
DB search
MTERKGTAKLDFLRKIEEDMQQKWEKERTFDCDAPTTIGESTNKNKYFVTFPYPYMNGRL
HLGHTFCLSKCEFAVGFQRLKGKQCLFPFGLHCTGMPIKACADKLKREMEVYGNPPQFPL
EEEEEEEEKPKFADEFIIKDKAKGKKSKAVAKAGGSKFQWDIMKSLGLSDMEIVPFANAA
HWLEYFPPMTVKDLKMMGVKVDWRRSFITTDVNPFYDSFVRWQFITLKERKKIKFGKRYT
IYSPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVVEPYPAKLSGLKGKNIFLVAATLRPET
MFGQTNCWVHPDIKYIAFEMACGDVFISTRRSARNMSYQGFTKENGKVTVIMDVLGKDIL
GCALSAPLSSYRTIYALPMLTIKEDKGTGIVTSVPSDAPDDIAALRDIKKKQALREKYGI
EDKMVLPFEPVPIIEIPGYGNLSAPLVCDELKIQSQNDREKLAEAKEKVYLKGYYEGIML
VEGYKGQKVQDVKKPIQTMMVEKGQALIYMEPEKQVMSRSSDECVVALCDQWYLDYGDKE
WKQQAMECLKPLETFCDETRKNFEATLDWLQEHACSRTYGLGTRLPWDQQWLIESLSDST
IYMAYYTVAHFLQGGVLNGQGPSPLGIKPEQMTREVWDFIFFKSSPFPKTDIPKEHLQRL
RREFEYWYPVDARVSGKDLVPNHLSYYLYNHVAMWPNDSGKWPQAVRANGHLLLNSEKMS
KSTGNFLTLSEAIAKFSADGMRMALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMI
ANQNNLRTGPADTFNDRVFGSDMNAGIMKTEQHYQRMMYKEALKSGFFEFQAAKDKYREL
AIEGMHRDLVFQFIEKQTLLLAPICPHLCEHTWGLMGKTGSLMKALWPVAGPVDEVLMRS
SQYVMETAHDLRIRLKAYLAPPKSKKGDVKPTAKPSHCTIYVAKTYPSWQHSALSLLGKH
YKSNKGALPDNKVIAMELGALPELKKYMKRMMPFVAMIKENLEKNGARVLDLELEFDERA
VLLENLVYLTNSLELDQIDVVFASEADDKIKEDCCPGKPFSVFRSEPGVAVSLLNPQPSN
GLFTTTIDIRQGDSRDSIIRRLSKVNRFIKDLSKVKLMRFEDPVLGPRRVPILGREEQGK
LPISDKSSFSISLADRKVLMTDNGLSVDIGDTLVYLVQ
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcggaagggaacagctaagttggacttcctcagaaagatagaagaggacatg
cagcagaaatgggagaaggaaagaacgtttgattgtgatgcacccaccactattggggaa
agcaccaacaaaaacaaatactttgtcaccttcccctacccttacatgaatggaaggctg
catcttggtcatactttctgcctttcgaagtgcgagtttgctgttggtttccaacgcttg
aaagggaagcaatgcctatttccatttgggttgcattgtacaggaatgccaatcaaagcc
tgtgcagacaagctgaagagagagatggaggtttacggcaacccaccacagtttccttta
gaggaggaggaggaagaagaggagaagcccaagtttgcagatgagttcatcatcaaggac
aaagctaagggcaaaaagagcaaagcagtggcaaaggctggagggtcaaaattccagtgg
gacataatgaagtctctggggttgagtgacatggagatagtgccgtttgcaaacgcggcg
cactggctggagtacttcccacccatgaccgtgaaagacctgaagatgatgggtgtgaag
gtggactggcgacgctccttcatcacaaccgatgtcaacccgttctacgactccttcgtg
aggtggcagttcatcaccctgaaagagaggaagaaaatcaagtttggtaaaaggtatacc
atctactctccaaaagatggacagccatgtatggaccatgacaggcagactggagaggga
gttggaccacaggagtataccctcatcaagatgaaggttgtagagccctaccctgcaaaa
ctaagtggccttaaaggaaagaacatcttcttggtggcagctactctcagaccagagacc
atgtttggccagactaactgctgggtccatcctgacatcaagtacatagcctttgagatg
gcctgtggagacgtgttcattagcacgaggaggtcagctaggaacatgtcttaccaaggc
ttcaccaaggagaacggcaaggttacagtgatcatggatgttctgggaaaggatattctt
ggatgtgctcttagtgccccgctgtcgtcttaccggaccatctatgccctgcccatgctt
accatcaaggaggacaaaggcactggaattgtcaccagcgtaccgtccgacgcacctgat
gacatcgctgccctcagggatatcaaaaagaaacaggccctgagagagaaatatggtatc
gaagacaagatggtcctaccttttgagccggtgcctatcattgagatccctggctatggg
aacctgtctgctcctctggtgtgtgacgagttgaagatccagagccagaatgaccgtgag
aagctggcagaggccaaggagaaggtttacctcaaggggtactatgaaggaatcatgctg
gttgaaggctacaagggccaaaaggtccaggatgtcaagaaacccatccagacgatgatg
gtggagaagggccaagctttgatctacatggagccagagaagcaggtgatgtcacgctct
tcagacgagtgtgtggtggcactatgcgaccagtggtatctggattatggagacaaagag
tggaaacagcaagccatggaatgcctgaagccactggagacgttctgtgacgagacaagg
aagaactttgaggccactctggactggctccaggagcacgcctgctctcgtacctacgga
ctgggtacaaggttgccatgggaccagcagtggctgatcgagtccctatctgactccacc
atttacatggcctactacaccgtggctcacttcctccaggggggagtgctcaatggacag
ggaccctctcctctagggatcaagccagagcagatgaccagggaggtgtgggacttcatc
ttcttcaagagctctcccttccccaagacggacatccccaaggagcacctgcagaggctg
aggagggagtttgagtactggtaccccgtggatgcccgtgtgtctgggaaggacctggtg
cccaaccacctatcctactacctgtacaaccacgtggccatgtggcccaatgacagcgga
aaatggccgcaggcagtccgagccaatggtcacctgttattgaactctgaaaagatgtct
aaatccacgggcaatttcctcactctgagtgaagccatcgccaagttctctgctgacggg
atgcgcatggccctggctgacgcgggagacacagtggaagacgctaactttgtggaggcc
atggccgacgctggcatcctgcgcctctacacctgggtggagtgggtcaaggagatgata
gccaatcagaacaacctgaggaccgggccagccgacaccttcaacgaccgcgtgttcggc
agtgacatgaatgcaggcatcatgaagaccgagcagcactatcagaggatgatgtacaag
gaggcgttgaagagcggcttctttgagttccaggcagccaaggataagtacagggagctg
gccatcgaggggatgcaccgggacctggtgttccagttcattgagaagcagaccctgctg
ctggcccccatctgcccacacctctgtgaacacacctggggtctcatgggcaagactggc
tctctgatgaaagcattgtggccagtggcaggtccagtagacgaggtgctgatgcgctct
tctcagtacgtcatggagacagcacatgacctaagaatacgtctcaaggcctacctggca
ccccccaagagcaagaagggtgacgtgaagcccacggccaagccctcccactgcactatc
tacgtggcaaagacgtacccctcttggcagcacagcgccctctcgctgttgggaaaacac
tacaagagcaacaagggcgctctgcctgataacaaggtcattgccatggagcttggcgcc
ctgccggagctcaaaaagtacatgaagagaatgatgccattcgtggccatgatcaaggaa
aacctggaaaagaatggcgccagggttctggacctggaactggagtttgacgagcgagcc
gtgctgctggagaacctagtttatctgactaactctttggagcttgatcagatagatgtg
gtattcgcatcagaggcagatgacaaaataaaggaggactgttgcccagggaaaccgttc
agtgtcttcagatccgaacccggagtagcagtgtccctgctcaacccccagccatccaac
ggtctcttcaccaccactattgacatccgacagggcgacagcagagacagcatcatccgg
agactatccaaagtcaacagattcattaaagacctgtccaaagtgaagctgatgcgcttt
gaggaccctgtcctggggcctcgccgggtgcccatcctggggagggaggagcagggcaag
ctacctatctctgacaagtcgtccttcagcatcagcctggctgacaggaaggtccttatg
acagacaatggcctcagcgtagacataggagacaccctggtgtacctggtacaatag
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