Oncorhynchus tshawytscha (Chinook salmon): 112258155
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Entry
112258155 CDS
T05605
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112258155
04121 Ubiquitin system [BR:
otw04121
]
112258155
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112258155
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Atypical E3
112258155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112258155
NCBI-ProteinID:
XP_024288093
UniProt:
A0A8C8GRJ3
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All DBs
Position
LG09:complement(44717571..44720595)
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AA seq
593 aa
AA seq
DB search
MSSASQASSRRQWCYLCDLPKMPWAMLWEFSEAVCRGCVNYDGADRIELLIETARQLKSS
HGVLDGRSPGPQQGKPSSGGPMEGGRQHAERLDRGRGEYGVSPRLPNGLHRAEDVSMSEG
SRQSPNTRRAMAGAAPALHGTIPHALIAQGLVGAPHGLLAPVSGTRAGGQQMAGSSGHIM
GGDGRRQVMSAMSLGAGASTLVGLEAGWRNGEVMAELAESARSRAEGWPNRPRAVRDVLV
TLCGCAPFSVRFRKDHNLVGRILAFEAGTGPEFELKVFVEYPSGSGIVFSGIPELVRQMF
RDSNKDAGKAVNSGLRYVEYERRQGAGDWRALTELLSDGVRSFKEPPMPEILPQPYTDAG
MPMAPAGRSAPTKGAARRRKASPSSENGESDGRPMGDHPAREPWSRGAYPGMEPLGSGMT
NPQDGLPRSHSQPSPISALMGVADSLSSSQMSRDGPGLSSAHSSAAGRPTSGSPSSASTA
VSQADMGQGAQGGPSTTSAGDSGSGALLCCTLCRERLEDTHFVQCPSVPHHKFCFPCTRG
SIRSQGPGGEVYCPSGERCPLAGSTVPWAFMQGEISTILAGDGDVTVKKENDP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgcctcgcaggcatcctctagacggcaatggtgctacctctgcgatctgccc
aagatgccctgggccatgctctgggaattcagcgaagctgtttgccggggatgcgtgaac
tacgacggggcggacagaatcgaactcctaattgagacggccaggcagttgaagagtagc
cacggtgttttggatggaaggtccccgggccctcagcaaggcaaacccagctcaggtgga
ccgatggaaggagggaggcagcatgcagaacgtttagacagggggaggggagagtatggc
gtttcaccccgcctccccaatggtctgcacagagctgaagatgtgagtatgtcagagggg
agcagacagagccccaacactagaagggctatggctggggccgcacctgctctacatggg
accatacctcatgctttgatagcccaggggttagtgggggcccctcacggcttgttggcc
cccgtttcaggcaccagagctgggggccagcagatggctggttcctctggccatataatg
ggtggtgatggaaggcgccaggtaatgtcagccatgtcgctgggggctggtgcctccact
cttgtgggtctggaggcaggctggaggaatggtgaggtcatggctgagctggcagagagt
gccaggagccgggcagagggctggcccaaccgccccagagcagtacgagacgtcctggtg
accctctgcggctgtgcccccttcagtgtgcgcttcaggaaagaccacaacctggtgggg
cgcattctcgctttcgaagccgggaccgggcctgagtttgagctgaaggtatttgtggaa
taccccagcggctctggaatagtcttctcgggcatcccagagcttgtcaggcagatgttt
cgtgactcaaacaaagacgcgggcaaagcggtgaactcagggctgcgttacgtggaatat
gagaggcgacagggcgctggggactggcgtgcgctcacggagctccttagtgacggtgta
cgctcgtttaaggagccaccgatgcccgagatcctcccacagccgtacacagatgccggc
atgcccatggcgcccgccggccgctctgcacctacgaagggtgctgcacggcgacgcaaa
gcatcaccaagctctgaaaacggagagagtgatggaaggcccatgggggatcatccagcc
agagagccctggtctcgaggtgcatatccaggcatggagcccctaggttcaggcatgacc
aacccccaggacggcctgccccgctcacacagccagccctcgcccatctcagcgctcatg
ggagtggccgacagcctaagctcaagccagatgtcccgagacggccccggcttgtcctca
gcccattcctctgcagctggccgcccaaccagcgggagtccctcctctgcctccaccgca
gtctcccaggcagatatgggtcagggtgcccaaggggggccgagcactaccagcgctggg
gattccgggagcggcgccctgctttgctgcaccctctgccgagagcgcctggaagacact
cactttgtccagtgtccgtctgtcccgcaccacaagttctgcttcccatgcacgcgtggc
tccatccgcagtcagggccctggaggagaggtgtactgccccagcggcgagcgttgtccc
ctggccggatccaccgtaccctgggctttcatgcagggagagatctccaccatcctggcc
ggagatggcgatgtgacggtgaagaaggagaacgacccctga
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