Oncorhynchus tshawytscha (Chinook salmon): 112258285
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Entry
112258285 CDS
T05605
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04114
Oocyte meiosis
otw04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
112258285
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
112258285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112258285
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112258285
Factors involved in mRNA localization
Trans-acting binding proteins
112258285
mRNA cycle factors
P-body specific factors
112258285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
112258285
NCBI-ProteinID:
XP_024288324
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All DBs
Position
LG09:complement(54715181..54742930)
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AA seq
709 aa
AA seq
DB search
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNASQSPGAFINSTTAGNGSNNGSPW
LFSATAAHSSMQDEILGSEKPKAQQQEMQETQEKQLLSPGHPESGIVSELEKARSEENKV
EGGLSEGSNGKEKLRLESPVLTGFDYQETSGLGTPCQSSTSSSLTGFNNWSAAISQTPST
IINEDVSFFNPAASANNGPLLFQNFSHHVSPGFGGNFSPQIGPISQHHPPHPHFQHPHNQ
HQQHRRSPASPHPPPFPHRNAAFSQLPHLSNNLNKPPSPWGSYQSPSPSPSSTSWSPGGG
YGGWGGSQGREYRRGLNGGMTPLNSISPLKKTFPNNHVPSQKYSRTSPGFNPKSWMDESV
SRSENIFPFQERTRSFDGFNMHSLENSLIDIMRAEQDTLKARNYGRRRVHSSLFPMEDGF
PDDERGEQSLPGLGSPHCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFV
DWPHKAESKSYFPPKGYAFLLFQDESSVQALIEACIEEDGKLYLCVSSPTIKDKPVQIRP
WNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY
PKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFA
PFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggtttggagtcttagtgcaaaataacactggcaacaagtctgctttc
ccagtcagaattcatccacatctgcaacctccacaccatcatcagaatgcgtctcaaagc
cctggtgcttttataaacagtaccacagctggcaatggcagtaacaatgggtcaccttgg
ctgttttcagccacagctgcccacagcagcatgcaagatgaaattcttgggtcagaaaag
cccaaagcccagcaacaggaaatgcaagaaacgcaagaaaaacagctactatcccctggc
cacccggagtctggaatcgtatctgagttagagaaggcgaggtcagaggagaacaaggtg
gagggcggcctctctgagggtagcaatggaaaagagaagctgcgcctcgagtccccagta
ctgacaggcttcgactaccaagagacatcaggtcttgggactccgtgccagtccagtacc
tcctcgtccctgactggcttcaacaactggtcagctgctatttcccagaccccttccacc
atcatcaacgaggatgtcagcttctttaacccagctgcctctgctaacaacgggcccctc
ctgttccagaatttctcccaccacgtcagcccaggcttcgggggaaacttctctccccag
attggacccatctcccagcaccatcccccacacccccactttcagcatccccacaaccag
caccaacagcaccgaaggtccccggccagcccccaccctcctcccttcccccataggaat
gctgcctttagccagttgccgcatttatccaataacctgaataagcccccgtcaccttgg
ggtagctaccaaagcccttctccctccccctcctccacctcctggagccccggtgggggc
tatggtggctggggaggctcccaggggcgtgagtaccgtcgaggcctcaacggaggcatg
actcccctgaactcaatctccccgctgaagaagaccttccccaacaaccacgtgccgtcg
cagaagtactcccgcaccagccctggcttcaaccccaagtcctggatggacgagagtgtg
agcaggagtgagaacatcttccccttccaggagcgcaccagatcctttgatggcttcaac
atgcactccctggagaactctctcattgacatcatgagggctgagcaagataccctgaaa
gcaaggaattatgggaggagacgagtccattcttccctgttccccatggaggatggtttc
cctgacgacgagcgtggcgagcagagcctgcctggcctaggctcaccccactgcttcccc
caccagaacggtgagcgagtggagcgctactcacgcaaggtcttcgttggcggtctcccc
cctgatattgatgaagatgagataactgctagtttccgtcgctttggacacctctttgtg
gactggcctcacaaggcagagagcaaatcttactttcccccgaaaggttatgccttcctg
ctgttccaggatgagagctctgtgcaggccctgattgaggcctgtattgaagaggacggc
aagctctacctgtgtgtgtccagccccaccatcaaagacaagccggtccagatccgcccc
tggaacctgaacgacagtgactttgtgatggacggctcccagcctctggaccccaggaag
accatatttgtgggtggggtgccacgccctctccgtgcagtggagctagcaatgatcatg
gacaggctgtatggaggggtgtgctacgccggtatcgatacagaccccgagctcaagtac
cccaagggagcagggcgggtcgccttctctaatcagcagagctacattgctgctatcagc
gctcgttttgtccaactacagcatggagaaatcgataaacgggtggaagtgaagccatac
gtcctggacgaccagctgtgtgatgagtgtcagggaacccggtgtgggggcaagtttgcc
cccttcttctgcgccaacgtcacctgtcttcagtattactgtgaatactgctgggcggcc
attcactcacgcgccggccgggagttccacaagccactggtaaaggaaggaggggaccgg
cctaggcacatctccttccgctggaactga
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