Oncorhynchus tshawytscha (Chinook salmon): 112258328
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Entry
112258328 CDS
T05605
Name
(RefSeq) rabankyrin-5-like isoform X1
KO
K20129
rabankyrin-5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258328
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112258328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
FYVE
BTB
BACK
Nup54
FYVE_CARP1-2
Val_tRNA-synt_C
FYVE_2
Motif
Other DBs
NCBI-GeneID:
112258328
NCBI-ProteinID:
XP_042183042
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Position
LG09:57209697..57249187
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AA seq
1168 aa
AA seq
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MAEEEVAKLQKHLALLRQEYVKMQQKLADTERRCAMLAAQASVQGSTKASVAGSEDTFIS
RLLEIVAELYQQDQYSDLKVTVGETTLNAHKFVLAARSDTWSLANLASISKLDLSDAKPE
VAMAMLRWAYTDDLELSENDAFLIDLMKLANRFQLQLLRERCEKGVMSSVNVRNCIRFYQ
TAEELDATTLMNYCGEIIASHWDDLRKEDFSTMSAPLLFKMIKSKTDFPLHKAIKVERED
VVFLYLIEMDSQLPGKLNELDNNGDLALDLALSRKLESIATTLVNNKADVDMVDQSGWNL
LHKAIQRGDEFASTFLIRHLAQVNAATVGAVETPLHLVCSFSPKKHSGEVMSGMARIAEA
LLKTGANPNMQNSKGRTPLHEAVVSGNEPVFNQLLHCKQLDLELKDHEGSTALWLALQYI
TVSSDANVNPFEDDAPVVENGTLFDENSFAAQLIQRGSNPDAPDTTTENCLMQRATGVGS
EAAALFLATHGAKVNHANKWGETPLHTACRCGLAGLTAELLHQGANPNLQTQKALPDEGV
SLQSPLHMAIVHNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSMDQTVLGLALWTGM
HTIAAQLLGSGASINDTMSNGQTLLHMAIRRQDSKSALFLLEHQADINVKTQEGETALQL
AISNQLPLVVDAICTRGADMSVVDERGHPPLWLALENGLEDIASTLVRHGCDATSWSSGP
SGCQQTLLHRAVDENNEVTACFLIRSGCDVNSPRRPGLNGEGDEEARDGQSPLHLAGSWG
LEEVVQCLLEFGANVNTQDAEGRAPIHIAISNQHNVIIQQLISHPDIRLNARDRLGMTPF
ACAMTHKNNKAAESILKREPGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNSRV
QDAAKHTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLATVCSVLLEN
GVDFTALDENGNNALHLAVMQGRLNNVRALLTESNIDAEAFNLRGQSPMHVLGQYGKENA
AAIFELFLECMPEYPLDKPDNEGNTVLLLAYMKGNANLCRAIVRSGACMGLNNNQGINIF
NYQVATKQLLFRLLDMLSKEPPWCDGSNCYECAAKFGVTTRKHHCRHCGRLLCHRCSIKE
IPIIKFDLNKPVRVCDICFDVLTLGGVS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggaggtggccaagctgcagaagcacctagccctgctgaggcaggagtat
gtgaagatgcagcagaagctggctgacacagagaggcgctgtgccatgcttgctgctcag
gcctctgtccagggctccaccaaggcctccgtagccgggtcagaagacaccttcatcagc
cgcctgctggagatcgtggctgagctctaccagcaggaccagtacagtgatctgaaggtg
acggttggagagacgacgctcaacgctcacaagtttgtcctggctgctcgcagtgatacc
tggagcctggctaacctggcctcaatctccaaactggacctgtctgatgccaagccggag
gttgccatggcgatgttgcgctgggcctacacagacgatctggagctcagtgagaacgat
gccttcctcatcgacctgatgaagctggccaaccggttccagctgcagctgctccgagag
aggtgtgagaaaggggtgatgtcatctgtgaatgtgaggaactgtatccggttctaccag
actgctgaggagcttgacgccacaacactcatgaactactgtggagagattatcgccagc
cactgggatgacctaaggaaagaggacttcagcactatgagtgcaccgctgctcttcaag
atgatcaagtctaaaacagatttccctcttcacaaagccatcaaagttgagagggaagac
gtggtcttcctctacctcattgagatggactcgcagttgcctgggaagctgaatgaactg
gacaacaatggagacttggccctggacctggctctgtctcgtaaactggagagtatcgcc
accacgctggtcaacaacaaagcagacgtggacatggtggaccagagtggctggaacctc
cttcacaaagccatccaaagaggtgatgaatttgcctccaccttcctgatccgccacttg
gcccaggtgaacgcagccacggtcggggcggtagaaacccctctgcacctggtgtgttcc
tttagccccaagaagcactctggggaggtgatgagtggcatggcccgcattgcagaggcc
ctgctcaagacaggggccaaccccaacatgcagaacagcaagggaagaacacccctacat
gaagcggtggtgtcggggaatgagcctgtgttcaaccagctcctacattgtaaacagctg
gacctggagctgaaggaccatgaggggagcacagctctgtggctggccctgcagtacatc
actgtgtcctctgacgccaacgttaacccctttgaggacgatgctccggtggtggagaat
ggaacactgtttgatgaaaacagctttgcagcccagctcatccagagaggcagtaaccca
gacgcaccagacacaaccacagagaactgtctcatgcagagggcaacgggtgtaggcagt
gaggctgctgccctcttcctggccacacatggggcaaaggtcaaccatgccaacaaatgg
ggtgagacccctctccacacggcgtgtcgctgtggtttggctggcctgacagcagagctt
ctccatcagggggctaaccctaacctgcagacgcagaaggccctccccgacgagggggtg
tccctgcagagcccgctccacatggccatcgtacacaaccaccctgacgtggtgtcagtc
atcttggagcagaaagccaatgctcttcacgccaccaacaacctgcagatcatcccagac
ttcagcctcaaagactccatggaccagacggtgttgggcctagccctttggacaggtatg
cacaccatagcagcccaactcctgggctctggggcgtccatcaacgacaccatgtccaac
ggtcagaccctgctgcacatggccatccgcagacaggacagcaagagtgccctgttcctc
ctggagcaccaggctgacatcaatgtcaaaacccaggagggtgagacggcgctgcagctg
gccatcagtaaccaactccccctggtggtggacgccatctgcacacggggggccgacatg
tccgtggtggatgagaggggacacccccctctgtggctggccctggagaacggtctcgag
gacatcgcatccacactggtccgacacggttgtgatgccaccagttggagctctggtccc
tcaggctgtcagcagaccctcctccacagggctgtggatgagaacaacgaggtcaccgcc
tgcttcctcatccgcagtggttgtgacgtaaacagcccacggcgtccaggtcttaacgga
gagggggatgaggaggccagggacggacagtcacccctccatctggcaggcagctggggg
ctggaggaggtggtgcagtgccttctggagtttggggcaaatgtcaacacacaggacgca
gagggccgagcgcctatccacattgccattagcaaccagcacaatgtcatcatccagcag
ctcatatcccacccggacatacgtctgaacgctcgtgatcgcctgggcatgacccccttt
gcctgcgccatgacacacaaaaacaacaaggctgcagagtccatcctcaagagagagccc
ggggctgccgaacaggtggacaacaaagggcgtaacttcctgcatgtggcggtgcagaac
tctgacatcgagagtgttctgttcctgatcagtgtccaggccaacgtgaactcccgggtg
caggatgcggccaagcatactcctctacacctggctgttcaggctggctctgagatcatc
gtccgcaacctactgctggcaggggccaaagtgaatgagctgaccaaacacagacagaca
gctctacacctggcagcccagcaggacctggctactgtctgctctgtgctgctggagaat
ggagtggacttcaccgctttggatgagaatggcaacaacgccctgcacctggccgtaatg
cagggtcgccttaataacgtgcgtgcccttctcacagagtccaacattgatgcggaggcc
ttcaatctcaggggccagtcaccgatgcacgttctggggcaatatgggaaagagaatgcg
gcggccatctttgaactgttcttggaatgtatgcctgagtaccctctggacaaaccggac
aatgaagggaacacagttctgttgctggcctacatgaagggcaatgctaacctctgtcgt
gccattgtgaggtctggagcttgtatgggcctcaacaacaaccagggaatcaacatcttc
aactaccaagtagccaccaagcagctgctcttccgccttctagatatgttgtccaaagag
cccccgtggtgtgatggctcaaactgttatgaatgtgctgccaagtttggagtcaccaca
agaaaacatcactgccgtcactgcggccgcttgctctgccacaggtgttccataaaggaa
atccccatcattaagtttgacctgaacaagcctgtgagggtctgtgacatctgcttcgac
gtgctgactctgggtggggtgtcctaa
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