Oncorhynchus tshawytscha (Chinook salmon): 112258342
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Entry
112258342 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112258342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112258342
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112258342
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112258342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
PA
Motif
Other DBs
NCBI-GeneID:
112258342
NCBI-ProteinID:
XP_024288430
UniProt:
A0A8C8G901
LinkDB
All DBs
Position
LG09:58219959..58378015
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AA seq
862 aa
AA seq
DB search
MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLK
KARLALERGAQAVIFDVTDDKDAALELHESDSLPLPVVLVKAKDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHPHPYPHAFPQHPIPFSMRP
HYPRGPSGPYPSLSHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPRSHRSCHAYRSGCPAQRSNSSSRLHHTPSFAPRTSEGGAHSRGAEGGSC
SGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRRDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPQAVFSHVHYHRHRH
HHYGEDGEREHAQGQGPGRGSDEEQGAAVAIGSGTGSPPALDKDFPVCPLKHSPCQCPKA
EHTDSTEVHGHGIEGQDHELSLSPPSGPPPALVAPAPLAAPAPCCHQDHGRGGHPHRRAD
RLGGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGALG
GLEDWSCCGGPHHVVWQKRVQQAHSEPQLLGPGMGGPMDRPPPPCSRRHHGHHSPAHDRN
TDFCLYCQTLHNNQGSEEESGV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggccagacgggcctggagctggcggcggccgtagaaacggagcgctcg
gcccccagggctgtcatcaaggtgacactgctaagacacgagcccacggggaagcccatc
actctggaagggctgttcgtaggagggagcgccggctctgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaagctggagagcccggagcgcaaggtgccccagtgtctgcccctgctcaag
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aaagacgctgctctcgagctgcatgagtctgactccctgccgcttccggtggtgctggtg
aaggctaaggatgctgaggagctgatgggactggttaacaagaacgaggaggctagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctc
actatagtcctggctattctggccatcgttctgatctttgcattccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagctctcagggctgcgggggctcacagcgccaccgtggaggctggggg
tctaatagcagctccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgcccatgagttccataaggagtgtgtggacccc
tggttgttgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacccccacccctacccacacgccttcccccagcatcccatccccttctccatgaggcct
cactacccccgtggcccctccggcccctacccctccctgagccactacagcagctcccca
cccctggacccccagaccctccgcttcctccctagctggcctcttggctccggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgcaggacg
gcaggtcaccctctggggtcccactacggccccaggtcccaccgctcctgccacgcctac
cgctccggctgccctgcccagcgcagcaactccagttccaggctccaccacaccccctcc
tttgctccccgcacctccgaagggggagcccatagccggggagccgagggaggcagctgc
tctggggggagctaccggacggagcgcagtggctacctggcagatgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtg
tccctgcagggtgtgtatggtagctggtccacgttccgcagctccctgagcagtgactat
gatccgtttgtgtactacgggccgggtttgggacggacaggccgcagggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagaggacgaggg
agccctgaggagcagccgcaggctgtgtttagccacgtccactaccaccgccacagacac
caccactacggagaggacggggagcgggagcacgcccagggacaggggccaggcaggggg
tcagacgaggagcagggggctgctgttgctattggctctggtactggttctcccccggct
ctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccctaaggca
gaacacacagacagtacggaggtccacggccacgggatagagggtcaggaccatgagctt
agcctcagccccccgtcaggcccccctcctgccctggtagcaccagcacccttagcagcc
ccagccccctgctgccaccaggaccacggccgtggaggccacccccaccggagggcagac
cggctcggcggctgcgtcctcgacggcccctcggtgctcttccaccagagcctggaactg
caggatgactgtagcatccacattcactacggccagggccccagctactgctgccccccg
cctgacctgcccatgcctgtgcctttcattctggactctgggggtatgggggccctaggg
ggcctagaggactggtcctgctgtggagggccccaccatgtagtgtggcagaagcgggtg
cagcaggcccactctgagccccagttgctggggccagggatggggggccctatggacaga
cccccgcccccatgcagcaggcgtcaccacggtcaccacagcccagcgcatgaccgcaac
acagacttttgtttatactgccaaacattacacaacaatcagggatcagaggaggagtcc
ggtgtgtga
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