Oncorhynchus tshawytscha (Chinook salmon): 112258420
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Entry
112258420 CDS
T05605
Symbol
syt5a
Name
(RefSeq) synaptotagmin Va isoform X1
KO
K19905
synaptotagmin-5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258420 (syt5a)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
112258420 (syt5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PTEN_C2
DOCK-C2
SARAF
RCR
Motif
Other DBs
NCBI-GeneID:
112258420
NCBI-ProteinID:
XP_024288544
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Position
LG09:65907382..65920682
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AA seq
411 aa
AA seq
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MRLASVQARARRAAEEREEPPPGPAPPSTHHSDHQFKNMKSKFFNELTHMPNHKLKMPMW
AIGAIVVVVLALVACLCFCIWKKCINKGKKPKKVRERKGGRGRRKKEGAGEGEEGKEGEG
KEGEEEEKENFGKLEFTLDYNFTDNQLIVGILQAENLAAMDMGGTSDPYVKVYMLPDKKK
KFETKVQRKNLCPVFNETFIFKIPYQELGGQTLVLQVFDFDRFGKHDVIGQISIPMNSVD
LAQPLHEWRDLVGGEKEEVEKLGDICISLRYVPTAGKLTINIMEAKHLKAMDCGGLSDPF
VKVVLQHQGKRLKKKKTTVKQNTLNPYFNESFSFEIPFGQIQKVQVLITVYDYDKLGSND
AIGKVWIGFGASGVGLRHWSDMLANPRRPVAQWHALCPEEEVDEALKKPLR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggccagtgtgcaagcgcgggctcgtcgggcggctgaggagagagaagagccg
cccccaggccccgcccctccctccacccaccactctgatcaccagttcaagaacatgaag
agcaagttcttcaacgaactcacccacatgccaaatcataaactcaaaatgcccatgtgg
gcaataggagccatagtggtggtggtgctggctctggtggcctgtctttgtttctgtatc
tggaagaagtgcatcaacaagggcaagaagcccaagaaagtgcgggagaggaaaggaggc
cgaggcagaagaaagaaggagggagccggagaaggagaggagggcaaggaaggagagggt
aaggaaggagaggaggaggaaaaagagaatttcggaaaactggagttcaccctggactac
aacttcactgacaaccagctgatcgtgggcatcctgcaggctgaaaacctggcagccatg
gacatgggcggcacctcagacccctatgtcaaggtatacatgctgccagacaagaagaag
aagtttgagaccaaagtccagcgcaagaacctatgccccgtgttcaatgagaccttcatc
ttcaagatcccctaccaggagctgggcggtcagactctggtcctgcaggtctttgacttt
gatcgctttggtaaacacgacgtgattgggcagatctccatccccatgaacagtgtggac
ctggctcagccactccacgaatggagggatctggttggaggagagaaagaggaggtagag
aagctaggggacatctgtatctctctgcgctacgtccccacggccggtaaattgaccatc
aacatcatggaggccaagcacctgaaggcgatggactgtggaggcttgtcagatcccttc
gttaaagtggtgctgcagcaccaaggcaagcggctgaagaagaagaagacgacggtcaaa
cagaacactctgaacccctacttcaacgaaagcttcagcttcgagatcccctttggccaa
atacagaaagtccaagtgttgatcacggtgtacgattacgacaagctgggcagcaacgac
gccatcgggaaggtttggatcggcttcggcgcctcaggtgtgggcctccgccattggtca
gacatgctggccaatccaagacgtcccgtggcccagtggcacgccctgtgtcctgaggag
gaggtggatgaggccctgaagaaacccctccgctaa
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