KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112258423
Entry
112258423         CDS       T05605                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03020  RNA polymerase
otw04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112258423
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    112258423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112258423
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     112258423
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 112258423
NCBI-ProteinID: XP_042182668
LinkDB
Position
LG01:complement(84648547..84668902)
AA seq 705 aa
MTSPPPLTMASGEDDDPVIQEIDVYLAKSLADKLYLFQYPVRPSSMTYDDITHLSAKIKP
KQQKVELEIAINTLSPNYCRSKGEQIALNVDGTTSEDSNTYSVKMMDKQTFTSIQSTTNT
SRYAAAIFRKGELHITPLQGILQMRPSFSYLDKADCKHREREAANEGGDSSQDEADEDVK
AVTVRFSRPESEQARQRRIQSYDFLQKKQAEESWVHLHYHGLNDGRSDHEKLYLYCQAMG
GSENTELVKTPKEYLAMLMPPVAEEKIVRPVGPSNMLSMAQLRTLPLGDQIKTLMKNVKV
MPFANLMGLLTPGTDSTAVLRCIQQVALLVQGNWVVKSDVLYPKNSCSPHSGVPAEVLCR
GRDFVMWRFTQDRSVMRKEIAAIIKLPPEDVKDFLEHMAVPRINRGWEFLLPCDGSFIKK
HPDVAQRQHMLWMGIQSKLEKVFTFSKDDLVSKKDLETETVHVSGEQRLKAAHERARHNQ
PSLEKDLSARRQGGAGASGGTGVRVKEEPVSEDEPMDSCSSVHPNGLVNGYPSSSATCPA
SNPHNGHGGTPTPSPSPELRDFVWNTFRKQHVLTLSEVKRLFNLHLASLPPGHSLFHSIS
DRLLQDTILMSQCKQILVPFPAQSTAAADEQKVFVVWETGETFDKHRQVLYEIFMKNYRV
RRNVIQTRLTQELGDQTTKADMDRLLKECCVSLGGMWYLKGTLQS
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgacatctccccctcccctcaccatggccagcggggaggacgatgaccccgtcatacaa
gagattgatgtatacctggccaaaagccttgcggacaagctctatctgttccagtatcca
gtacgcccttcctctatgacctatgatgatatcactcatctgtctgccaagatcaagccc
aagcagcagaaggtggagttggagatagccatcaacactctgagtcctaactactgtcga
agtaaaggcgagcagattgccctcaatgtggacggaaccacctcagaggactccaacacc
tactctgtgaagatgatggacaagcagacgttcacatccatccagtccacgaccaacacc
tccagatacgctgctgccatcttcaggaaaggtgagctccacatcacgccgctgcagggc
atcctccagatgcgacccagcttctcctatctggacaaggctgactgcaaacacagagag
cgggaggccgctaacgaggggggagactcctctcaggacgaggcagatgaagatgtcaag
gccgtcactgtgaggttttcccgtcctgagtcggagcaggctcgtcagaggcgtatccag
tcgtatgacttccttcagaagaaacaggcagaggaatcctgggtccacctgcactaccac
ggcctcaatgacgggcgttcggaccacgagaagctatatctgtactgccaggctatggga
ggttccgagaacacagaactggtgaaaactccaaaggagtacctggcaatgctcatgcct
cctgtcgcagaggagaagattgtgaggcccgtaggtcccagtaacatgctgtccatggcc
cagctccggacgctgccgctcggtgaccagatcaagaccctgatgaagaacgttaaggtg
atgccgtttgccaacctgatgggtttgctgacccctgggacagactccactgcagtgctg
cgctgcatccagcaggtggcgctactggtgcagggcaattgggtggtcaaaagtgacgtg
ctgtatcctaagaacagctgtagtccccacagtggtgtgcctgctgaggtgctgtgtcga
ggaagagactttgtgatgtggagattcactcaggatcgctcggtgatgaggaaggagatt
gcagccatcatcaagctccccccggaggacgtgaaggacttcctggaacatatggcggtg
cctcgaatcaaccgtggctgggagttcctgttgccatgcgacggttccttcatcaagaag
caccctgacgtggcccagcggcagcacatgctgtggatggggatacagagcaaattggag
aaggtcttcaccttctctaaggatgacctggtatccaaaaaggacctagaaacagaaact
gtgcacgtgagtggcgagcagcggctgaaggctgcccatgaacgtgcacggcataaccag
ccctctctagagaaggacctgagcgctcgtcgacagggtggagccggggcgagtggcgga
actggggttcgggtcaaagaagaacctgtcagtgaagacgaacccatggactcgtgctca
tccgtgcaccctaatggtttggttaacggttacccctcatcctccgctacctgccccgcc
tcaaaccctcataacgggcacggcgggacccccactccctcaccgtcccctgagctgagg
gactttgtgtggaacacgttcaggaagcagcacgtgctgacgctgagcgaagtcaagagg
ctgttcaacctccacctggcctccctgcctcctggacacagcctgttccactccatctca
gaccgcctactacaggatactatactgatgagccaatgcaaacagatactggtgcctttt
ccagcccagagcacggcagctgcggatgagcagaaggtgtttgttgtgtgggagacagga
gagaccttcgacaagcaccgtcaggtcctgtatgagatcttcatgaaaaactaccgggta
aggaggaacgtgatccagaccaggctgacgcaggagctgggagaccagactaccaaggcc
gacatggaccgcctgctcaaggagtgctgtgtgagcttaggagggatgtggtacctcaag
ggtaccctacagtcctga

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