Oncorhynchus tshawytscha (Chinook salmon): 112258425
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Entry
112258425 CDS
T05605
Symbol
cpt1a2b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00071
Fatty acid degradation
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04148
Efferocytosis
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112258425 (cpt1a2b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112258425 (cpt1a2b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112258425 (cpt1a2b)
03320 PPAR signaling pathway
112258425 (cpt1a2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112258425 (cpt1a2b)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
112258425 (cpt1a2b)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112258425 (cpt1a2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
112258425
NCBI-ProteinID:
XP_042183203
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Position
LG09:complement(65998758..66062330)
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AA seq
781 aa
AA seq
DB search
MAEAHQAVAFQFTITPEGIDLRLSYQALSQIYLSGLRSWKKRISRMRNRVIKGVYPASPS
SWLFVVIAILATMYMRSDPSMGLIAKIQEHLPVSSLSLSVQGQTMLSVLVFSTLLWLSLI
LTLRFCLKLLLSYHRWMFEQHGHISTTTKVWVTLVRLLSGRKPLLYSYQTSLPCLPVPPI
KDTLERYLESVRPLLSGPGFQRMTVLAAQFENSLGNRLQRYLKLKALWATNYVSDWWEEY
IYLRGRGPIMVNSNYYGMDFLYVTPTPIQAARAGNTITALLLYRRKVNSEQLTPSRVPGT
VIPLCAAQCERMFNTTRTPGEETDVLQHWQDSEFVTVYHRGRYFRLWVYKAGRLLSPREI
EYQIQRILDDPSPPGPGEDRLGALTAGDRVPWCAVRKQYFSSGVNKRSLDCIERAAFFVT
LDDEEQGMMGEDPVGNLDRYAKSLLHGKCYDRWFDKSFSVVVYKNGKNGLNAEHSWADAP
TVAHLWEFTLATDAFQLGYTEDGHCKGEVERSLPPPQRLTWDIPVEVQEQVSISLSVAQA
LADDVDCHVFPFRDFGKGRIKKLKISPDAFIQLALQLAYYRDRKTFCLTYEASMTRLFRE
GRTETVRSCSNEGCAFVKAVESGEGPEHCRRLFRLAAEKHQNLYRLAMTGSGIDRHLFCL
YVVSKYLGVESPFLTEVLSEPWRLSTSQTPVQQLELFDMKNHPDFISLGGGFGPVADDGY
GVSYIIVGEDMINYHVSCKHSFSETDSHRFGAQISRALLDLLSVLTPAKTENSQAQDKKQ
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcccaccaggcagtggcgttccagttcaccatcacccccgaggggatcgac
ctgcgcctttcctaccaggccctgtcccagatctacctctctggcctgcgctcctggaag
aagaggatcagccgcatgaggaacagggtgatcaaaggggtgtaccctgccagcccttcc
tcctggctgtttgttgtcatagccatcctggccaccatgtacatgcgctctgacccctcc
atgggcctcattgccaaaatccaggagcacctgcccgtcagtagtctttctctgagtgtc
cagggccagaccatgctgtcagtgctggtgttcagtaccctgctgtggctgtcgctcatc
ctgaccctgaggttctgtctcaagctgctgctctcctaccaccgctggatgttcgagcag
cacgggcacatctccaccaccaccaaagtctgggtgaccctggtgcgtctgctgtctggc
aggaagcctctcctatacagctatcagacctctcttccttgcctgcccgtcccgcccata
aaagacacactggagaggtacctggagtcggtgcgtccgttgctgagtggcccggggttc
cagcggatgactgtgttggcggctcagtttgagaacagtctggggaacaggttgcagcgc
tatctcaagctcaaagctctgtgggctaccaactatgtgagtgactggtgggaggagtac
atctacctacgaggacgaggtcccatcatggtcaacagcaactactatggcatggacttt
ctgtatgtgactcccactcccatccaggcagcgagggccggcaacaccatcaccgctctg
ctgctctaccgacgcaaggtcaacagtgagcagctaacgcctagtcgtgttccaggtaca
gtcatccctctctgtgcagctcagtgtgagaggatgttcaacactactcgcaccccagga
gaggagactgatgtgctgcagcactggcaggacagtgaatttgtgactgtctaccaccgg
gggcgctacttcaggctgtgggtctacaaggcggggcgtctcctctcccctagagagata
gagtaccagatccagaggatcctagatgacccttcaccccccggacctggagaagacagg
ctgggagcactgactgctggagacagggtgccgtggtgtgccgtaagaaagcagtacttc
agctcaggggtgaacaagcgctcgctggactgcatcgagcgggccgccttctttgtcacc
ctggacgatgaggagcaaggaatgatgggagaagaccctgtgggaaacctggaccgctac
gccaagtccctcctccacgggaaatgttatgacaggtggtttgataagtcattctctgtg
gtggtgtacaagaatgggaagaatgggctgaatgcagagcactcttgggccgacgccccg
acagtggcacacctgtgggagttcaccctggccacagatgccttccaactgggttacaca
gaggacggccactgtaagggagaggtggagcgctccttaccgccccctcagagactcacc
tgggacatccctgtggaggttcaggagcaggtgtccatctctctgtctgtggcacaggcc
ctagctgacgatgtggactgtcatgtcttccccttcagggactttgggaagggacgcatc
aaaaagctgaagatcagcccagacgccttcattcaattggctctgcagctagcttactac
agggatcgtaagacgttttgcctcacctacgaggcctccatgacacggctgttccgagag
gggaggactgagactgtacgatcctgctccaatgagggctgtgcctttgtcaaagctgtg
gagagcggagaggggccggagcactgcaggcggcttttccgattggctgctgagaagcac
cagaacctctaccgattggccatgacagggtccggcattgacaggcacctcttctgcctg
tacgtggtgtctaaatacctgggggtggagtcaccgttcctaacagaggtgctgtcagag
ccctggcgcctctccaccagtcagactccggttcagcagttggagctgtttgacatgaag
aaccacccagactttatatctctggggggaggctttggccctgtggcagacgatggctac
ggagtgtcgtacattatcgtaggagaggacatgatcaactaccatgtatcctgcaagcac
tccttctctgagacggactcacaccggttcggggcccagatcagtcgggctctattggac
ctcctctctgtgcttaccccagctaagacagagaactcacaggcccaggataagaaacag
cagtga
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