Oncorhynchus tshawytscha (Chinook salmon): 112258444
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Entry
112258444 CDS
T05605
Symbol
brd4
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain-containing protein 4
KO
K11722
bromodomain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112258444 (brd4)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112258444 (brd4)
03036 Chromosome and associated proteins [BR:
otw03036
]
112258444 (brd4)
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: Other
BRD family [OT]
112258444 (brd4)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Brd4/P-TEFb complex
112258444 (brd4)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112258444 (brd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BET
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
112258444
NCBI-ProteinID:
XP_024288574
LinkDB
All DBs
Position
LG09:66661773..66702352
Genome browser
AA seq
1622 aa
AA seq
DB search
MDYKMHAKSNDLLDFQTLDALLEKMAHYSSVSVKREASEECNGISGALSVESSAPPSRLN
NWCPAATAAPTPTLTPAPAPVPAPPVTYARMGDGLDATTVQMSSSGSSSSSQGGQPQPST
YVPTVPEFNPPPPEYINPSQPKRQTNQLQYLLKAVLKTLWKHHFSWPFQAPVDAVKLNLP
DYYKIIKVPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEQLEK
MFLQKITEMPQDETEIAVMTGKGRGRGRREGGLNLKPGPTMDSPSTTPQTRGFSSHSPGP
QTRGPPVQQQTQEQGPPSLPPQPLMQALPSRVPPTLPVHTHAHAPQLGAPYSLGPSDLPL
QAPPKLPIMTTVPPPPTQTTLPPTSIQSTAPILQNPVPMAKQRKSQKRKADTTTPTANDQ
LSESSPAESKSGKTLPRRESARPTKLLKKEAPDSQHHLGLGIGLGLGGPVGPGVGAHSPK
QQEQLRYCSSLVRDMLHKKHAAYAWPFYKPVDVDMLGLHDYHDIIKHPMDLATVKVKLDN
RQYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEETLPSAP
TPALLQSSAPIIKSQPPPILNPASSILGPASSVKHPASSSDSSSDSSSESESSTNDLEEE
RAQRLAELQEQLKAVHEQLAALSQPQASKPKRKEKEKKKDKHKRKGAVEEIPEPAIQFPK
KTKNNNNNNSSSSNNNNKELLPKKTKKPSKKEGGTVKNNRSSALGPQAAQQPPALQPVSG
LGEGLEEDPAAAGAPGEKGKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNSN
PDEIEIDFETLKPSTLRELERYVSSCLRKNKKKVPVAEKTMEAMTAAKTKASSSSDSDSS
DSSSSDSDEEKGVAPKQKQKKGHGTNEGKKPHLHHAMSGAGPVPQGHPHAQAPVLQPSIH
LKQQQHNPSPATYMAPPPPVTVTALESSQLLENTFDSLPHFGQQPLMHLSQHHHSSSPAV
PPHLNAHSAAGPVSPETHPFLNQHPILSNPNPALHNALPQQPSRPSHRAAALPPKPPQQQ
QPAPQPTLQQQQQLQPQAPPPQHHLPPHILHPPPQSLQQRPLXPPTLTPQGLLSSQPPQM
LLEDDEEVVPPLPQMHLYLQQGQSQGQSQGRPGQQPHNPQQIMQSLQVRQQQNQAPLLQS
VQVQTASLQPPQLSVQPPQPQSKPIPPSRQILPPHQVARHLQQHAQMGYPSQGPVAQQTG
HSDRQATAGQHKGSMQASAKAQHIIQQQQHPSPRQIKADPYNSGHLRENPSPIMMHSPHL
PQYPPITHQSPPHNLQPKKEQRAPPALVALKEEKLPPSPVMRGGEPFSPAMRQDPHKHPD
SHSKPSLPGHAQQSEYTDVKSMDSSRPVIRSSEPSGPPSSSSSLPDKDKFKQEPKTPIAP
KKDVKLKNMGSWASLAQKSTSAPLSAVKSSSDSFEQFRRAAREKEEREKALKAQAEQAER
DKLRREQEKLRGRDRDDEDILEPQQQSRRVHEEPRSRRLEQQQHIPAPQPQQQPQAPTPQ
AQPAALPQPPQAPTPPQPSAQDQQRELARRREQERRRREAMAATIDMNFQSDLMAIFEEN
LF
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggattacaagatgcatgccaagtctaacgatctgctggattttcagactctggatgct
cttttggaaaaaatggcacattattcttctgtctctgtgaaaagagaggctagtgaggag
tgcaatggaatcagcggtgctctctcagtggagtcgtccgcgccgccgtcgagactgaac
aactggtgtcccgcggccaccgccgcccctaccccaacccttacccctgctccggcccct
gtgcccgcgcccccagtcacctacgcaagaatgggggacggcctggatgcaaccacagtg
cagatgtcttcgtcaggcagcagtagcagtagccagggggggcagccccagccctccacc
tacgtacccaccgtgccagagtttaacccaccgcccccggagtacatcaacccgtcgcag
cccaagcggcagaccaaccagctgcagtacctgctcaaggcggtgctgaagaccctgtgg
aagcaccacttctcctggcccttccaggcacctgtcgacgccgtcaagctcaacctgccg
gactactacaagattattaaagttcctatggatatgggcacaatcaagaagcgacttgag
aacagctactactggaacgcccaagaatgtattcaagacttcaacaccatgttcaccaac
tgctacatttacaacaagcctggagatgacatagtgttaatggctgagcagctggagaag
atgtttctccagaagattactgagatgccccaggacgagacggagattgctgtcatgacc
ggcaagggtcgaggccggggccgacgggaaggaggtctgaacttgaagccaggcccgact
atggattctccgtccaccaccccccagacacggggcttctccagccactccccaggcccc
cagaccagaggaccaccagtgcagcaacagacccaggaacaggggcctccatctctacct
cctcagcccctcatgcaggccctgccctcccgcgtgcccccaacgctacctgtccacacc
catgcccatgcgccacagctcggggccccctactcactgggcccgtcggacctgccactc
caggcccctcctaagctccctatcatgaccaccgtgcctcctccccccacccagaccacc
ctgccccccacgtccattcagagcaccgcccccatactgcagaaccccgtgcccatggcc
aaacagagaaagagccagaaaaggaaagccgacacgaccacccccacggccaacgaccag
ctgagcgagtcttctccggctgagtccaagtcgggcaagacgctgccacggcgagaaagc
gccaggcccaccaagcttctcaagaaggaggctccggactcccagcaccacctgggcctt
gggataggtctcggtctcgggggacccgtaggaccaggggtaggggctcatagccccaag
cagcaggagcagctacggtactgctccagcttggtccgagacatgttacataagaagcac
gctgcctacgcctggcccttctacaagccagtcgacgtggacatgctggggctgcacgac
taccacgacatcatcaaacaccccatggacctcgccaccgtcaaggtgaagctggacaac
cggcagtacagagacgcccaggagtttgctgccgacgtgcggttaatgttctccaactgc
tacaagtacaacccacccgaccacgaggtggtggcgatggcacgcaaactacaggacgtg
tttgagatgcgctttgccaagatgccagacgagcccgaggagacgctgccttcggctcct
acccccgcgctgctccagtcctctgcccccatcatcaagtcccaaccgccgcccatccta
aaccccgcctcctccattctaggtcctgcctcctcagtcaaacaccccgcttcctcctcg
gacagctccagtgattcgtcatcggagtcggaatcgtccacgaacgacttggaggaggag
agagcccagagactggccgagctacaggaacagctcaaagctgtccatgagcagctggcg
gccctctcgcagccacaggccagcaaaccaaagaggaaagagaaggagaagaagaaagac
aagcacaaaaggaaaggagcggtggaggagatcccggagccggccattcagttccccaag
aagaccaagaacaacaacaacaacaacagcagcagcagcaacaacaacaacaaggagctc
ctgcccaagaagaccaagaaacccagtaagaaggagggaggtacggtgaagaacaaccgc
tcctcagccctgggccctcaggcagcgcagcagcccccagctctgcagcccgtgtctggc
ttgggggagggcctggaggaggacccggctgcagccggagcccccggggagaagggtaag
cccatgtcgtacgaggagaagaggcagctgagtctggacatcaacaagctgcccggcgac
aagctgggtcgtgtggtccacatcatccagtccagagagccctcgctgaagaactccaac
cccgacgagatcgagatcgactttgagacgctcaagccatccacgctgagagagctggag
agatacgtgtcgtcgtgcctccgcaagaacaagaagaaggttcctgtggcagagaagacc
atggaggccatgacggccgccaagaccaaggccagctcctcctctgactcggacagcagc
gactccagctcctcagacagtgatgaggagaagggagtggctcctaaacagaaacagaag
aaaggccacgggaccaacgaagggaagaagccccatctccaccatgccatgtctggagct
ggtccggtcccccagggccaccctcacgcccaggctcctgtcctgcagcccagcatccac
ctgaagcaacagcaacataacccctcccccgccacctacatggcccctcctcccccggta
acggtcacggcgttggagtcctcccagctgctggagaacacgtttgattcgctgccccac
ttcggccagcagcccctcatgcacctgtcccagcaccaccactcctcgtcgcctgccgtg
cccccccacctcaacgctcattccgcagcagggcccgtgtccccggagacgcacccattt
ctcaaccagcaccccatcctctccaaccctaacccagctttgcacaacgccttgccccag
cagccgtctcgacccagccacagggcagcagctctacctcccaaacccccccagcagcag
caaccagcgccccagccaaccctacaacaacaacaacagcttcagccacaagcccctcca
ccccagcaccacctcccgccccacatcctccacccaccccctcagtccctgcagcagcgg
cccttgnntccccccaccctcacccctcagggcctgctgtcctcccagcccccccagatg
ctcctggaggacgatgaggaggtagttccacccttacctcagatgcatctctacctgcag
cagggacagagccagggacagagccagggaagacctggccagcaaccacacaatccccag
cagattatgcagtctctccaggttcgccaacaacagaaccaggctcccctcctgcagtct
gtacaggtccagaccgcctctcttcagcccccccagctctcagtccagcctccccagccc
cagtccaagcccatccccccctcgcgccagatcctacccccgcaccaagtagcccgccac
ctgcagcagcatgcccagatgggttacccctcccaggggccggtggcacagcagacgggt
cactcagacaggcaggccactgcagggcaacacaaggggtcaatgcaggcctccgccaaa
gcacagcacatcattcagcaacagcaacacccctcccctcgacagatcaaggctgatcca
tataacagtgggcacctaagggagaacccctcccccatcatgatgcattccccccacctc
ccccagtatccccccataacgcaccagtctccgccacacaacctgcagcccaagaaagaa
cagcgtgcacccccagccctggtagccttgaaagaagagaagttgcctccctctccggtg
atgagaggaggagagcccttcagcccagccatgagacaagaccctcacaaacaccctgac
agccacagcaagccctctctaccaggccacgcacagcagagtgagtacactgatgtgaag
tcgatggacagctcaaggccggtcatccgttcctcagagcccagcggtcctccctcctcc
tcctcctccctgccagacaaggacaagttcaaacaggagcccaaaacgccaatcgccccc
aaaaaggatgtgaaactgaagaacatgggttcgtgggccagcctggcccagaagtccacg
tcagcgcccttgtctgcagtgaagtcgtctagcgacagcttcgagcagttccgccgggcc
gcccgggagaaagaggaaagagagaaggctcttaaggcccaggcagagcaggctgagagg
gacaaactgcgccgggagcaggagaaactacggggtcgtgaccgggatgatgaggatatc
ctggagcctcagcagcagtcgaggagggttcatgaggagcctcgaagcagacgtctggag
cagcagcaacacatcccggccccccagccccagcagcaaccccaggcaccaaccccccaa
gcccagcccgctgccctcccccagccgccacaggcccccacaccgccccagccctcagcc
caggaccagcagagggagctagcgagacgccgcgagcaggagaggaggaggagagaagcg
atggcggcgaccatcgacatgaatttccaaagcgacctgatggccatctttgaggagaac
ttgttctag
DBGET
integrated database retrieval system
