KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112258510
Entry
112258510         CDS       T05605                                 
Name
(RefSeq) interferon beta-like
  KO
K05414  interferon alpha
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060  Cytokine-cytokine receptor interaction
otw04217  Necroptosis
otw04620  Toll-like receptor signaling pathway
otw04621  NOD-like receptor signaling pathway
otw04622  RIG-I-like receptor signaling pathway
otw04623  Cytosolic DNA-sensing pathway
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    112258510
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    112258510
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    112258510
   04621 NOD-like receptor signaling pathway
    112258510
   04622 RIG-I-like receptor signaling pathway
    112258510
   04623 Cytosolic DNA-sensing pathway
    112258510
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112258510
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:otw04052]
    112258510
Cytokines and neuropeptides [BR:otw04052]
 Cytokines
  Interferons
   112258510
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 112258510
NCBI-ProteinID: XP_024288699
LinkDB
Position
LG09:68788790..68789781
AA seq 187 aa
MTLQTVTWMSAFLCLAQVCSMPMPCQLQGQLVRITHNLLRDMGGNFPLECLQENVFVPFP
ATAFATSDAPQLSSSDPKAIYETLKNIDTLFGADDLPTKWDQRKLENFQNIVYRQIEESK
CMMGSVDTSDYLIRTEGLKTYFGNIAAVLKEKNFSYCAWEVVRQELLYSLQFILQHNSDS
LLWANRT
NT seq 564 nt   +upstreamnt  +downstreamnt
atgacacttcagactgtcacttggatgagcgccttcctctgcctcgcgcaagtttgctcc
atgcccatgccttgccagctacaaggacagctggtgcgaataacccacaacctactgaga
gacatggggggtaattttcctctggagtgcctgcaggagaatgtcttcgtgccattccca
gccaccgcatttgcaacctccgatgcgccacagttgagcagcagtgatcctaaggctatt
tatgagacattgaagaacatcgacacattgtttggagctgatgacctgcctactaagtgg
gaccaacggaagttggagaattttcagaatattgtataccgccagattgaagagagtaaa
tgtatgatgggcagtgtggataccagtgattatctcatcaggacagaaggactgaagacg
tactttggaaacattgcagcagtcctaaaagaaaagaatttcagttactgcgcctgggaa
gtggttcgacaagagctcctgtacagcctacagttcattctgcaacacaactctgatagc
cttctgtgggccaacagaacatga

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