Oncorhynchus tshawytscha (Chinook salmon): 112258518
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Entry
112258518 CDS
T05605
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00603
Glycosphingolipid biosynthesis - globo and isoglobo series
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
112258518
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112258518
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
112258518
Glycosyltransferases [BR:
otw01003
]
Glycan extension
FORS blood group (Forssman antigen)
112258518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
112258518
NCBI-ProteinID:
XP_042183244
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Position
LG09:complement(69032183..69046469)
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AA seq
351 aa
AA seq
DB search
MRFSSNVKPHVLLLIVGTILLLGYVYFNFFSERLNGDILINEDQKSTSLSRLVFRSRVRN
MVSPEKLLYKQPSVLVGRTDVVSVTPWLAPIVWEGTFDPVLVDNIYKPMNLTVATTVFAI
GKYVRFLQDFLETAEKHFMVGFHVRYYVFTDRPHDVPSVNLSQGRHLSVIQVPGSNRWQE
ISARRMEIIQTTIERQIRREADYIFCLDVDSKFHARWGSESLGRLVAVIHPGYYEQTRDR
FPYERRPASTAYIPMDEGDYYYGGAMIGGFVEDVYTLTKVCRTRFEEDAGNSIEAAWQEE
SHLNRYLLDNKPSKVLSPEYLWQDFKAKTKEVKVIRFSGVIKNYADVRPNV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttagttcgaatgtcaagccacatgttctgcttctcattgttggaacgatcttg
cttctggggtatgtctacttcaacttcttctctgaaagactcaacggagatatcctaatt
aatgaggaccagaagagcaccagcttgagtcgactcgtgttcaggagcagagtacggaac
atggtctctcctgaaaagctattgtacaagcagcccagtgtcttggtgggacgtactgat
gtggtgtcagtgaccccatggttggcacccatcgtctgggaaggcacctttgaccctgtg
cttgtcgacaatatctacaagcccatgaacctcaccgtagcaaccacagtgtttgccatt
ggaaaatacgtcagatttctccaagattttctggagacagcagagaagcacttcatggtc
ggcttccacgtgcgctactacgttttcactgatcgtccccacgatgttccttcagtgaac
ctgtctcaggggagacatctgagtgtgatccaggtcccgggttcaaaccgctggcaggag
atatcagcccggaggatggagatcatccagaccaccatcgaacgtcagatcagaagggag
gccgactacatcttctgtctggacgtagacagcaagttccacgctcgctgggggtcagag
tctcttggaaggctggttgctgtgatacacccaggctactacgagcagacccgtgaccgc
ttcccgtacgaacggcgtccagcctcgacggcctacatccccatggatgagggagactac
tactatggcggggctatgatcggagggttcgtggaggatgtgtacacactaacaaaggta
tgtcggacccggtttgaggaggatgcggggaattctattgaggctgcctggcaggaggag
agccacctcaacaggtacctgctcgacaacaagcccagcaaggtgttgtctccagagtac
ctgtggcaggacttcaaggccaaaaccaaagaggtcaaagtaattcgcttctcaggggtc
attaaaaactatgctgacgttcgtcccaatgtataa
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